Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm42772-201ENSMUST00000199945 3041 ntBASIC11.18□□□□□ -0.62
Trim41Q5NCC3 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim41Q5NCC3 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim41Q5NCC3 AC124421.1-201ENSMUST00000219114 4154 ntBASIC11.18□□□□□ -0.62
Trim41Q5NCC3 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim41Q5NCC3 Gm37914-201ENSMUST00000195317 2679 ntBASIC11.18□□□□□ -0.62
Trim41Q5NCC3 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trim41Q5NCC3 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim41Q5NCC3 AC122305.1-201ENSMUST00000214803 3921 ntBASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Gm14385-201ENSMUST00000116315 876 ntBASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Gm13811-201ENSMUST00000117800 256 ntBASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Gm11878-201ENSMUST00000117908 400 ntBASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC11.17□□□□□ -0.62
Trim41Q5NCC3 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Magea9-ps-201ENSMUST00000140655 732 ntBASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Gm25669-201ENSMUST00000157699 112 ntBASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Magea9-ps-202ENSMUST00000167328 899 ntBASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Gm29045-201ENSMUST00000187278 698 ntBASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Gm29332-201ENSMUST00000190829 227 ntBASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Gm45127-201ENSMUST00000205984 1015 ntBASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Mir484-201ENSMUST00000093566 67 ntBASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim41Q5NCC3 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Gm14220-201ENSMUST00000118114 449 ntBASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Gm11862-201ENSMUST00000119678 659 ntBASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Ear-ps12-201ENSMUST00000161720 451 ntBASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Gm23945-201ENSMUST00000179609 92 ntBASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Gm29231-201ENSMUST00000179850 319 ntBASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Gm26866-201ENSMUST00000180414 802 ntBASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Gm42805-201ENSMUST00000196158 276 ntBASIC11.16□□□□□ -0.62
Trim41Q5NCC3 AC115793.1-201ENSMUST00000216605 215 ntBASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim41Q5NCC3 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Trim41Q5NCC3 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm12633-201ENSMUST00000117742 1705 ntBASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm45250-201ENSMUST00000209414 3592 ntBASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm38120-201ENSMUST00000195506 4642 ntBASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm7363-201ENSMUST00000119883 399 ntBASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm12181-201ENSMUST00000121448 531 ntBASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Defb44-ps-201ENSMUST00000126871 219 ntBASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm25057-201ENSMUST00000157366 88 ntBASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm22355-201ENSMUST00000175531 96 ntBASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm5139-201ENSMUST00000175943 249 ntBASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm29596-201ENSMUST00000185710 385 ntBASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm6510-201ENSMUST00000195916 574 ntBASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm8681-201ENSMUST00000219115 618 ntBASIC11.15□□□□□ -0.62
Trim41Q5NCC3 AC165092.4-201ENSMUST00000225025 679 ntBASIC11.15□□□□□ -0.62
Trim41Q5NCC3 AC122448.1-201ENSMUST00000226317 772 ntBASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim41Q5NCC3 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trim41Q5NCC3 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim41Q5NCC3 Gm28379-202ENSMUST00000187676 2896 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 129.3 ms