Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm22778-201ENSMUST00000104090 128 ntBASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm24371-201ENSMUST00000122662 267 ntBASIC5.82□□□□□ -1.48
Nup88Q8CEC0 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm25534-201ENSMUST00000175365 125 ntBASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm2623-201ENSMUST00000199229 286 ntBASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm43919-201ENSMUST00000204303 364 ntBASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm44232-201ENSMUST00000204537 225 ntBASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm45610-201ENSMUST00000209227 784 ntBASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm9512-201ENSMUST00000223112 497 ntBASIC5.82□□□□□ -1.48
Nup88Q8CEC0 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm23796-201ENSMUST00000084011 160 ntBASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Nup88Q8CEC0 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.81□□□□□ -1.48
Nup88Q8CEC0 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm649-201ENSMUST00000117284 1054 ntBASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm11866-201ENSMUST00000120209 335 ntBASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm14619-201ENSMUST00000120480 168 ntBASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm5353-201ENSMUST00000139800 793 ntBASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm25655-201ENSMUST00000158465 290 ntBASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm43036-201ENSMUST00000200594 373 ntBASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm44919-201ENSMUST00000208587 1073 ntBASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm10145-201ENSMUST00000077776 462 ntBASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Nup88Q8CEC0 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm22468-201ENSMUST00000116680 120 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm26248-201ENSMUST00000116700 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm26137-201ENSMUST00000116701 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm26190-201ENSMUST00000116704 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm24617-201ENSMUST00000116705 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm25778-201ENSMUST00000116713 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm25774-201ENSMUST00000116717 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm22102-201ENSMUST00000116730 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm23177-201ENSMUST00000116784 121 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms