Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm25965-201ENSMUST00000157170 93 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm16558-201ENSMUST00000163015 532 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm26219-201ENSMUST00000175216 71 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm23816-201ENSMUST00000179617 132 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm18426-201ENSMUST00000191874 973 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm37719-201ENSMUST00000194615 292 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Gm26418-201ENSMUST00000104275 137 ntBASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Gm13503-201ENSMUST00000119017 446 ntBASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Gm5391-201ENSMUST00000121155 613 ntBASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Gm25748-201ENSMUST00000175487 70 ntBASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Gm37606-201ENSMUST00000191816 3116 ntBASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Gm25058-201ENSMUST00000157365 128 ntBASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Mir713-201ENSMUST00000178651 108 ntBASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Gm37964-201ENSMUST00000192459 4905 ntBASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.24□□□□□ -1.73
Col6a6Q8C6K9 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm14067-201ENSMUST00000119340 314 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm12041-201ENSMUST00000121606 602 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm23789-201ENSMUST00000122536 301 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm5473-201ENSMUST00000179326 642 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm34272-201ENSMUST00000208886 253 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm22868-201ENSMUST00000083955 164 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm12633-201ENSMUST00000117742 1705 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm37775-201ENSMUST00000194120 2313 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 AC124569.3-201ENSMUST00000224860 1621 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm14706-201ENSMUST00000117744 255 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Gm4734-201ENSMUST00000200117 777 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.23□□□□□ -1.73
Col6a6Q8C6K9 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms