Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 n-R5s58-201ENSMUST00000093682 119 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm22365-201ENSMUST00000093750 117 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm42544-201ENSMUST00000197868 3242 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm44584-201ENSMUST00000208395 2880 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm44288-201ENSMUST00000205061 2795 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm20172-201ENSMUST00000193138 1551 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm38381-201ENSMUST00000193594 2275 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm45061-201ENSMUST00000204395 2095 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm7658-201ENSMUST00000119064 1124 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm13788-201ENSMUST00000120767 601 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm13642-201ENSMUST00000121697 381 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm4660-201ENSMUST00000131499 403 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm25374-201ENSMUST00000158158 101 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 n-R5s209-201ENSMUST00000179494 119 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Mir6541-201ENSMUST00000183649 110 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm28069-201ENSMUST00000189926 214 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm37177-201ENSMUST00000193768 417 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Ighv12-1-201ENSMUST00000195542 329 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm44655-201ENSMUST00000207768 423 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm38574-201ENSMUST00000211855 640 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 AC160016.1-201ENSMUST00000215589 448 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 AC122225.1-201ENSMUST00000215641 369 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 AC132384.3-201ENSMUST00000219709 472 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 AC167222.2-201ENSMUST00000220014 295 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm17915-201ENSMUST00000222077 548 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 AC154481.1-201ENSMUST00000223532 331 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm24405-201ENSMUST00000083033 167 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Olfr895-201ENSMUST00000093864 951 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Gm43395-201ENSMUST00000198717 2240 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Cmah-208ENSMUST00000224819 9482 ntBASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim47Q8C0E3 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm44220-201ENSMUST00000203784 2487 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms