Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm12677-201ENSMUST00000118668 426 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm14352-201ENSMUST00000119250 449 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm17014-201ENSMUST00000120765 168 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm24628-201ENSMUST00000122761 289 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm26153-201ENSMUST00000157433 127 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm27155-201ENSMUST00000183716 898 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm2367-201ENSMUST00000192374 472 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm37445-201ENSMUST00000195318 242 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Mir5121-201ENSMUST00000198528 74 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm5317-201ENSMUST00000204445 847 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm18877-201ENSMUST00000207706 539 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm24763-201ENSMUST00000083688 190 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm22826-201ENSMUST00000083774 165 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.13□□□□□ -1.43
Ddx55Q6ZPL9 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm26377-201ENSMUST00000102184 108 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm13731-201ENSMUST00000117332 196 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm11708-201ENSMUST00000119530 832 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm9001-201ENSMUST00000121642 399 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm23993-201ENSMUST00000157478 144 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm22726-201ENSMUST00000158089 179 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm3563-201ENSMUST00000172963 1628 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm18358-201ENSMUST00000173179 1277 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm18416-201ENSMUST00000175635 1003 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm8941-201ENSMUST00000181451 899 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm37241-201ENSMUST00000191736 523 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm44074-201ENSMUST00000204562 337 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 AC118230.1-201ENSMUST00000220196 656 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 AC134860.3-201ENSMUST00000223564 1300 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Olfr815-201ENSMUST00000071557 951 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Olfr192-201ENSMUST00000080251 925 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Gm23686-201ENSMUST00000083241 164 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.12□□□□□ -1.43
Ddx55Q6ZPL9 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms