Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC7.59□□□□□ -1.2
Ube3bQ9ES34 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Ube3bQ9ES34 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC7.59□□□□□ -1.2
Ube3bQ9ES34 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Ube3bQ9ES34 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Gm43279-201ENSMUST00000202376 2512 ntBASIC7.58□□□□□ -1.2
Ube3bQ9ES34 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Dennd6a-203ENSMUST00000224111 2692 ntBASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Gm24709-201ENSMUST00000104123 132 ntBASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Gm12040-201ENSMUST00000118357 537 ntBASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Gm12607-201ENSMUST00000120724 493 ntBASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Gm13578-201ENSMUST00000120849 590 ntBASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Gm20530-201ENSMUST00000174261 254 ntBASIC7.58□□□□□ -1.2
Ube3bQ9ES34 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Gm17048-201ENSMUST00000179266 847 ntBASIC7.58□□□□□ -1.2
Ube3bQ9ES34 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Gm43368-201ENSMUST00000200638 409 ntBASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Gm44045-201ENSMUST00000204906 2520 ntBASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ube3bQ9ES34 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Mir678-201ENSMUST00000102114 84 ntBASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm24338-201ENSMUST00000104205 127 ntBASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm25117-201ENSMUST00000157194 144 ntBASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm22383-201ENSMUST00000158188 327 ntBASIC7.57□□□□□ -1.2
Ube3bQ9ES34 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm28061-201ENSMUST00000189085 807 ntBASIC7.57□□□□□ -1.2
Ube3bQ9ES34 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm29334-201ENSMUST00000190334 357 ntBASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm37501-201ENSMUST00000192830 691 ntBASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm37511-201ENSMUST00000192901 294 ntBASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm412-201ENSMUST00000193360 948 ntBASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm37743-201ENSMUST00000194645 376 ntBASIC7.57□□□□□ -1.2
Ube3bQ9ES34 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm42437-201ENSMUST00000197263 923 ntBASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC7.57□□□□□ -1.2
Ube3bQ9ES34 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC7.57□□□□□ -1.2
Ube3bQ9ES34 Gm18628-201ENSMUST00000220584 475 ntBASIC7.57□□□□□ -1.2
Ube3bQ9ES34 AC211878.1-201ENSMUST00000221668 474 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms