Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm13604-201ENSMUST00000119332 482 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm15060-201ENSMUST00000119550 948 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm12396-201ENSMUST00000121600 306 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm20462-201ENSMUST00000172623 408 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Mir6951-201ENSMUST00000183910 75 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Mir6362-201ENSMUST00000184329 107 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Mir496b-201ENSMUST00000184935 113 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm6717-201ENSMUST00000185549 838 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm29216-201ENSMUST00000187117 492 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm5252-201ENSMUST00000189030 909 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm28883-201ENSMUST00000189256 369 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm29038-201ENSMUST00000191543 678 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm37209-201ENSMUST00000194109 1276 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm44465-201ENSMUST00000199536 114 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm18405-201ENSMUST00000220743 511 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm25578-201ENSMUST00000083406 104 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Clp1Q99LI9 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm6757-201ENSMUST00000189810 1706 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.67□□□□□ -1.34
Clp1Q99LI9 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clp1Q99LI9 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm13137-201ENSMUST00000118035 345 ntBASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm11925-201ENSMUST00000121375 535 ntBASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm7855-201ENSMUST00000137737 687 ntBASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm11545-201ENSMUST00000146507 375 ntBASIC6.66□□□□□ -1.34
Clp1Q99LI9 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Vmn1r82-202ENSMUST00000191002 918 ntBASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm37103-201ENSMUST00000191830 115 ntBASIC6.66□□□□□ -1.34
Clp1Q99LI9 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm8454-201ENSMUST00000196980 811 ntBASIC6.66□□□□□ -1.34
Clp1Q99LI9 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm7034-201ENSMUST00000218638 645 ntBASIC6.66□□□□□ -1.34
Clp1Q99LI9 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm9237-201ENSMUST00000221499 548 ntBASIC6.66□□□□□ -1.34
Clp1Q99LI9 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.66□□□□□ -1.34
Clp1Q99LI9 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Clp1Q99LI9 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm42484-201ENSMUST00000196075 2104 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms