Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm21959-201ENSMUST00000178439 452 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Gm25361-201ENSMUST00000179358 76 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Trbv11-201ENSMUST00000194354 260 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Gm8686-201ENSMUST00000203028 388 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Gm5306-201ENSMUST00000203325 757 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim35Q8C006 AL645704.1-201ENSMUST00000221642 604 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Gm8508-201ENSMUST00000061226 363 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Gm6083-201ENSMUST00000075518 357 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 Vmn2r30-201ENSMUST00000072475 3616 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Gm37304-201ENSMUST00000193833 2886 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Olfr169-202ENSMUST00000215040 2316 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Trim35Q8C006 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim35Q8C006 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Dkc1-201ENSMUST00000033776 2804 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Gm27166-201ENSMUST00000184476 1930 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim35Q8C006 Gm12445-201ENSMUST00000117947 885 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 Gm12242-201ENSMUST00000118824 738 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 Gm25103-201ENSMUST00000122671 318 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim35Q8C006 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 Gm19705-201ENSMUST00000180495 496 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim35Q8C006 Gm6308-201ENSMUST00000203226 313 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 Gm34224-201ENSMUST00000204606 364 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 Gm44520-201ENSMUST00000205447 802 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 Gm45007-201ENSMUST00000206237 366 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 AC153845.1-201ENSMUST00000213596 428 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim35Q8C006 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim35Q8C006 AC123656.2-201ENSMUST00000226726 227 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 AC164883.2-201ENSMUST00000227931 3815 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 Gm23939-201ENSMUST00000082880 133 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 Fbxo9-201ENSMUST00000001402 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 AC133079.1-201ENSMUST00000220943 1881 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim35Q8C006 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim35Q8C006 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Gm26520-201ENSMUST00000180719 1423 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Gm5442-201ENSMUST00000202121 2034 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim35Q8C006 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim35Q8C006 Gm16465-201ENSMUST00000118585 1758 ntBASIC8.1□□□□□ -1.11
Trim35Q8C006 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Trim35Q8C006 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim35Q8C006 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 Gm43181-201ENSMUST00000197001 2072 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim35Q8C006 C2cd5-202ENSMUST00000111758 4062 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 AC153862.1-201ENSMUST00000215700 3349 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim35Q8C006 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
Trim35Q8C006 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC8.09□□□□□ -1.11
Trim35Q8C006 4933402N03Rik-201ENSMUST00000070980 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim35Q8C006 Snord19-201ENSMUST00000104609 76 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms