Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a1P02463 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a1P02463 Gm14067-201ENSMUST00000119340 314 ntBASIC5.72□□□□□ -1.49
Col4a1P02463 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.72□□□□□ -1.49
Col4a1P02463 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a1P02463 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.72□□□□□ -1.49
Col4a1P02463 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.72□□□□□ -1.49
Col4a1P02463 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a1P02463 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.72□□□□□ -1.49
Col4a1P02463 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC5.72□□□□□ -1.49
Col4a1P02463 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a1P02463 Gm23464-201ENSMUST00000083145 147 ntBASIC5.72□□□□□ -1.49
Col4a1P02463 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Col4a1P02463 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a1P02463 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a1P02463 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Col4a1P02463 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.72□□□□□ -1.49
Col4a1P02463 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a1P02463 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a1P02463 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a1P02463 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a1P02463 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.72□□□□□ -1.49
Col4a1P02463 Gm12252-201ENSMUST00000119517 219 ntBASIC5.72□□□□□ -1.49
Col4a1P02463 Gm27834-201ENSMUST00000183427 125 ntBASIC5.72□□□□□ -1.49
Col4a1P02463 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.72□□□□□ -1.49
Col4a1P02463 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a1P02463 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a1P02463 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.72□□□□□ -1.49
Col4a1P02463 Gm9616-201ENSMUST00000221154 781 ntBASIC5.72□□□□□ -1.49
Col4a1P02463 AC183096.1-201ENSMUST00000226392 130 ntBASIC5.72□□□□□ -1.49
Col4a1P02463 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a1P02463 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a1P02463 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Col4a1P02463 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Col4a1P02463 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Col4a1P02463 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col4a1P02463 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Col4a1P02463 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col4a1P02463 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Col4a1P02463 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Col4a1P02463 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Col4a1P02463 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col4a1P02463 Gm12041-201ENSMUST00000121606 602 ntBASIC5.71□□□□□ -1.5
Col4a1P02463 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.71□□□□□ -1.5
Col4a1P02463 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col4a1P02463 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.71□□□□□ -1.5
Col4a1P02463 Gm9294-201ENSMUST00000165198 789 ntBASIC5.71□□□□□ -1.5
Col4a1P02463 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.71□□□□□ -1.5
Col4a1P02463 Gm27896-201ENSMUST00000175162 317 ntBASIC5.71□□□□□ -1.5
Col4a1P02463 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.71□□□□□ -1.5
Col4a1P02463 Gm43828-201ENSMUST00000196890 639 ntBASIC5.71□□□□□ -1.5
Col4a1P02463 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.71□□□□□ -1.5
Col4a1P02463 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.71□□□□□ -1.5
Col4a1P02463 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col4a1P02463 AC174459.2-201ENSMUST00000226036 160 ntBASIC5.71□□□□□ -1.5
Col4a1P02463 AC102603.1-201ENSMUST00000227481 584 ntBASIC5.71□□□□□ -1.5
Col4a1P02463 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Col4a1P02463 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col4a1P02463 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col4a1P02463 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col4a1P02463 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col4a1P02463 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.71□□□□□ -1.5
Col4a1P02463 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
Col4a1P02463 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col4a1P02463 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col4a1P02463 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col4a1P02463 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col4a1P02463 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col4a1P02463 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.71□□□□□ -1.5
Col4a1P02463 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col4a1P02463 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col4a1P02463 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col4a1P02463 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col4a1P02463 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col4a1P02463 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.7□□□□□ -1.5
Col4a1P02463 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Col4a1P02463 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Col4a1P02463 Zfp389-201ENSMUST00000118425 675 ntBASIC5.7□□□□□ -1.5
Col4a1P02463 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.7□□□□□ -1.5
Col4a1P02463 Gm14037-201ENSMUST00000120576 313 ntBASIC5.7□□□□□ -1.5
Col4a1P02463 Gm5379-201ENSMUST00000120973 826 ntBASIC5.7□□□□□ -1.5
Col4a1P02463 Gm22536-201ENSMUST00000158171 134 ntBASIC5.7□□□□□ -1.5
Col4a1P02463 Gm24939-201ENSMUST00000158325 137 ntBASIC5.7□□□□□ -1.5
Col4a1P02463 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.7□□□□□ -1.5
Col4a1P02463 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col4a1P02463 Gm37501-201ENSMUST00000192830 691 ntBASIC5.7□□□□□ -1.5
Col4a1P02463 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col4a1P02463 Gm37495-201ENSMUST00000194590 264 ntBASIC5.7□□□□□ -1.5
Col4a1P02463 Gm44054-201ENSMUST00000203814 372 ntBASIC5.7□□□□□ -1.5
Col4a1P02463 Gm46190-201ENSMUST00000219650 427 ntBASIC5.7□□□□□ -1.5
Col4a1P02463 Mir383-201ENSMUST00000083523 70 ntBASIC5.7□□□□□ -1.5
Col4a1P02463 Mir412-201ENSMUST00000083636 80 ntBASIC5.7□□□□□ -1.5
Col4a1P02463 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col4a1P02463 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.7□□□□□ -1.5
Col4a1P02463 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col4a1P02463 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col4a1P02463 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col4a1P02463 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col4a1P02463 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col4a1P02463 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms