Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox1P53783 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
Sox1P53783 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox1P53783 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox1P53783 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox1P53783 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Sox1P53783 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox1P53783 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox1P53783 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sox1P53783 Gm45577-201ENSMUST00000210206 2287 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Sox1P53783 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sox1P53783 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sox1P53783 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sox1P53783 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.38□□□□□ -1.39
Sox1P53783 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.38□□□□□ -1.39
Sox1P53783 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Sox1P53783 Gm24430-201ENSMUST00000104077 104 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Gm23750-201ENSMUST00000104222 132 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Mir1193-201ENSMUST00000116761 121 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Gm14677-201ENSMUST00000117866 486 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Gm12230-201ENSMUST00000118301 454 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Gm13711-201ENSMUST00000119708 453 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Gm14331-201ENSMUST00000120396 409 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Gm22959-201ENSMUST00000122514 303 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.38□□□□□ -1.39
Sox1P53783 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Gm24225-201ENSMUST00000158825 98 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC6.38□□□□□ -1.39
Sox1P53783 Cfap61-214ENSMUST00000167179 183 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC6.38□□□□□ -1.39
Sox1P53783 Gm27428-201ENSMUST00000184289 110 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Gm28429-201ENSMUST00000188521 363 ntBASIC6.38□□□□□ -1.39
Sox1P53783 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.38□□□□□ -1.39
Sox1P53783 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Gm42594-201ENSMUST00000199511 246 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Gm44048-201ENSMUST00000204531 361 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC6.38□□□□□ -1.39
Sox1P53783 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.38□□□□□ -1.39
Sox1P53783 Gm6171-201ENSMUST00000220760 645 ntBASIC6.38□□□□□ -1.39
Sox1P53783 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Olfr197-201ENSMUST00000080031 926 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.38□□□□□ -1.39
Sox1P53783 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sox1P53783 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sox1P53783 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.38□□□□□ -1.39
Sox1P53783 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 AC147639.2-202ENSMUST00000224834 1545 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Gm9496-201ENSMUST00000191295 1601 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.38□□□□□ -1.39
Sox1P53783 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Sox1P53783 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Sox1P53783 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sox1P53783 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
Sox1P53783 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Sox1P53783 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox1P53783 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC6.37□□□□□ -1.39
Sox1P53783 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox1P53783 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Sox1P53783 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox1P53783 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox1P53783 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox1P53783 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Sox1P53783 Gm42598-201ENSMUST00000200110 2437 ntBASIC6.37□□□□□ -1.39
Sox1P53783 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Sox1P53783 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox1P53783 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Sox1P53783 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox1P53783 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
Sox1P53783 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox1P53783 AC163660.3-201ENSMUST00000224253 1563 ntBASIC6.37□□□□□ -1.39
Sox1P53783 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox1P53783 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox1P53783 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox1P53783 Gm13006-201ENSMUST00000118683 214 ntBASIC6.37□□□□□ -1.39
Sox1P53783 Gm12900-201ENSMUST00000120919 573 ntBASIC6.37□□□□□ -1.39
Sox1P53783 Gm13531-201ENSMUST00000121893 543 ntBASIC6.37□□□□□ -1.39
Sox1P53783 Gm23792-201ENSMUST00000122557 93 ntBASIC6.37□□□□□ -1.39
Sox1P53783 Gm24385-201ENSMUST00000122694 350 ntBASIC6.37□□□□□ -1.39
Sox1P53783 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.37□□□□□ -1.39
Sox1P53783 Gm23740-201ENSMUST00000157385 100 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms