Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.72□□□□□ -1.33
Pde6bP23440 Gm45689-201ENSMUST00000210522 133 ntBASIC6.72□□□□□ -1.33
Pde6bP23440 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pde6bP23440 Gm8863-201ENSMUST00000216630 926 ntBASIC6.72□□□□□ -1.33
Pde6bP23440 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.72□□□□□ -1.33
Pde6bP23440 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC6.72□□□□□ -1.33
Pde6bP23440 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
Pde6bP23440 Ap3m1-208ENSMUST00000224016 764 ntBASIC6.72□□□□□ -1.33
Pde6bP23440 CT009600.1-201ENSMUST00000228771 337 ntBASIC6.72□□□□□ -1.33
Pde6bP23440 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pde6bP23440 Snora44-201ENSMUST00000082670 129 ntBASIC6.72□□□□□ -1.33
Pde6bP23440 Gm24405-201ENSMUST00000083033 167 ntBASIC6.72□□□□□ -1.33
Pde6bP23440 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pde6bP23440 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pde6bP23440 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Pde6bP23440 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.72□□□□□ -1.33
Pde6bP23440 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pde6bP23440 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Pde6bP23440 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pde6bP23440 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.72□□□□□ -1.33
Pde6bP23440 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pde6bP23440 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pde6bP23440 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.72□□□□□ -1.33
Pde6bP23440 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pde6bP23440 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pde6bP23440 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pde6bP23440 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.72□□□□□ -1.33
Pde6bP23440 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.72□□□□□ -1.33
Pde6bP23440 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pde6bP23440 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Pde6bP23440 Gm7269-201ENSMUST00000210819 1373 ntBASIC6.71□□□□□ -1.33
Pde6bP23440 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.71□□□□□ -1.33
Pde6bP23440 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pde6bP23440 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pde6bP23440 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC6.71□□□□□ -1.34
Pde6bP23440 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Pde6bP23440 Gm16394-201ENSMUST00000117289 675 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm12641-201ENSMUST00000117874 985 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm13641-201ENSMUST00000117993 473 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm16074-201ENSMUST00000119524 444 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm11484-201ENSMUST00000119808 338 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm12837-201ENSMUST00000120131 373 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm13489-201ENSMUST00000121234 971 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm26271-201ENSMUST00000158349 104 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm24734-201ENSMUST00000158860 262 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm9597-201ENSMUST00000171913 602 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.71□□□□□ -1.34
Pde6bP23440 Gm18342-201ENSMUST00000186987 694 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm29064-201ENSMUST00000187014 813 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm2427-201ENSMUST00000189121 881 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm37203-201ENSMUST00000191618 385 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pde6bP23440 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pde6bP23440 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.71□□□□□ -1.34
Pde6bP23440 Gm45034-201ENSMUST00000206831 482 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm17987-201ENSMUST00000206902 603 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pde6bP23440 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Gm34005-201ENSMUST00000215834 282 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.71□□□□□ -1.34
Pde6bP23440 AC131720.2-201ENSMUST00000220420 431 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Pde6bP23440 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Pde6bP23440 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pde6bP23440 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Pde6bP23440 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Pde6bP23440 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pde6bP23440 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pde6bP23440 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pde6bP23440 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
Pde6bP23440 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pde6bP23440 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pde6bP23440 Naip3-201ENSMUST00000118082 4208 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.71□□□□□ -1.34
Pde6bP23440 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pde6bP23440 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pde6bP23440 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.71□□□□□ -1.34
Pde6bP23440 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pde6bP23440 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pde6bP23440 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pde6bP23440 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pde6bP23440 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pde6bP23440 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Pde6bP23440 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.7□□□□□ -1.34
Pde6bP23440 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.7□□□□□ -1.34
Pde6bP23440 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.7□□□□□ -1.34
Pde6bP23440 Gm43369-201ENSMUST00000196373 1552 ntBASIC6.7□□□□□ -1.34
Pde6bP23440 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pde6bP23440 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.7□□□□□ -1.34
Pde6bP23440 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.7□□□□□ -1.34
Pde6bP23440 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pde6bP23440 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pde6bP23440 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Pde6bP23440 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms