Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm6872-201ENSMUST00000165001 700 ntBASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Gm6047-201ENSMUST00000167221 574 ntBASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Gm20701-201ENSMUST00000176082 347 ntBASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Gm10048-201ENSMUST00000194196 372 ntBASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Gm43237-201ENSMUST00000196835 1044 ntBASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.1□□□□□ -1.59
Cstf1Q99LC2 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.1□□□□□ -1.59
Cstf1Q99LC2 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
Cstf1Q99LC2 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Gm5045-201ENSMUST00000027054 810 ntBASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Gm25099-201ENSMUST00000093716 116 ntBASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Cstf1Q99LC2 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 AC122408.2-201ENSMUST00000217901 1391 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Snord66-201ENSMUST00000104051 75 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm12285-201ENSMUST00000117347 233 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm15421-202ENSMUST00000118224 399 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm13737-201ENSMUST00000119793 232 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm23229-201ENSMUST00000157297 105 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm23906-201ENSMUST00000157573 128 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm17081-201ENSMUST00000167363 478 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm24561-201ENSMUST00000175182 95 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm27690-201ENSMUST00000184596 126 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm27564-201ENSMUST00000185196 96 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Mrgprb13-201ENSMUST00000188191 985 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm2497-201ENSMUST00000189539 601 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm2622-201ENSMUST00000200018 471 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 AC142113.2-201ENSMUST00000217425 748 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm23875-201ENSMUST00000083711 318 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Cstf1Q99LC2 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Cstf1Q99LC2 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Cstf1Q99LC2 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.09□□□□□ -1.6
Cstf1Q99LC2 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.08□□□□□ -1.6
Cstf1Q99LC2 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Gm37470-201ENSMUST00000193378 2798 ntBASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Gm12931-201ENSMUST00000117046 324 ntBASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Gm14628-201ENSMUST00000117508 635 ntBASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Gm13367-201ENSMUST00000119955 796 ntBASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Gm24113-201ENSMUST00000157477 276 ntBASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Gm25224-201ENSMUST00000158195 68 ntBASIC5.08□□□□□ -1.6
Cstf1Q99LC2 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Gm8221-201ENSMUST00000178052 564 ntBASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Mir6960-201ENSMUST00000183449 61 ntBASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Gm37167-201ENSMUST00000194946 396 ntBASIC5.08□□□□□ -1.6
Cstf1Q99LC2 Gm17951-201ENSMUST00000198536 496 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms