Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm6445-201ENSMUST00000189515 1112 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm23925-201ENSMUST00000082471 132 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm37913-201ENSMUST00000192925 2544 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm11409-201ENSMUST00000118621 403 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm10357-201ENSMUST00000159886 264 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm17060-201ENSMUST00000172394 824 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Mir6345-201ENSMUST00000184286 128 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm43037-201ENSMUST00000196808 250 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm38218-201ENSMUST00000193555 4689 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm25539-201ENSMUST00000116886 122 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm5027-201ENSMUST00000206700 375 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm18599-201ENSMUST00000206729 1125 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Gm38257-201ENSMUST00000195881 2761 ntBASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Gm37342-201ENSMUST00000194588 4965 ntBASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Gm37278-201ENSMUST00000191619 2872 ntBASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Gm22569-201ENSMUST00000175545 124 ntBASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Gm45080-201ENSMUST00000206648 283 ntBASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 AC112972.2-201ENSMUST00000228702 2210 ntBASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Gm27165-201ENSMUST00000183951 232 ntBASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Gm42453-201ENSMUST00000200477 409 ntBASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col6a3E9PWQ3 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm15151-201ENSMUST00000117106 177 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm22380-201ENSMUST00000157479 95 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm22940-201ENSMUST00000158560 155 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm28574-201ENSMUST00000185757 699 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm28596-201ENSMUST00000185870 696 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm29062-201ENSMUST00000186032 694 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm28255-201ENSMUST00000187101 694 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm28397-201ENSMUST00000187970 699 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm29525-201ENSMUST00000189844 699 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm29523-201ENSMUST00000191415 699 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm32295-201ENSMUST00000192558 696 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm31260-201ENSMUST00000193478 696 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 AC164618.1-201ENSMUST00000225769 592 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms