Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Mir331-201ENSMUST00000083673 96 ntBASIC5.06□□□□□ -1.6
Vps39Q8R5L3 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Vps39Q8R5L3 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Vps39Q8R5L3 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.06□□□□□ -1.6
Vps39Q8R5L3 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.06□□□□□ -1.6
Vps39Q8R5L3 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
Vps39Q8R5L3 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Vps39Q8R5L3 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Vps39Q8R5L3 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm16463-201ENSMUST00000120527 721 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm14925-201ENSMUST00000120611 438 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm24395-201ENSMUST00000158139 125 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm3008-201ENSMUST00000160566 571 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm17091-201ENSMUST00000163248 357 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm9027-201ENSMUST00000165914 661 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm6673-201ENSMUST00000166114 700 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm6717-201ENSMUST00000185549 838 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm29148-201ENSMUST00000188140 336 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm29552-201ENSMUST00000190548 660 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm43054-201ENSMUST00000199495 884 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm21041-201ENSMUST00000214829 823 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps39Q8R5L3 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Gm15981-201ENSMUST00000119196 457 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Gm11584-201ENSMUST00000120636 325 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Gm14229-201ENSMUST00000121178 850 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Gm16456-201ENSMUST00000174431 920 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Mir7222-201ENSMUST00000183740 75 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Gm42459-201ENSMUST00000199679 742 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Gm3148-201ENSMUST00000203594 612 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Gm45026-201ENSMUST00000205292 833 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 AC079644.1-201ENSMUST00000220586 405 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Gm46996-201ENSMUST00000220924 408 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Gm25818-201ENSMUST00000083282 164 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps39Q8R5L3 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.03□□□□□ -1.6
Vps39Q8R5L3 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Vps39Q8R5L3 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Vps39Q8R5L3 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Vps39Q8R5L3 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms