Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm5750-201ENSMUST00000218711 801 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm17915-201ENSMUST00000222077 548 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm16415-201ENSMUST00000080097 489 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx3-1P97436 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Nkx3-1P97436 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Nkx3-1P97436 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Nkx3-1P97436 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Nkx3-1P97436 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Nkx3-1P97436 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
Nkx3-1P97436 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Nkx3-1P97436 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Nkx3-1P97436 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Nkx3-1P97436 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Nkx3-1P97436 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Nkx3-1P97436 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm12285-201ENSMUST00000117347 233 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm13491-201ENSMUST00000118267 235 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm15390-201ENSMUST00000120323 738 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm12466-201ENSMUST00000121199 620 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx3-1P97436 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm25665-201ENSMUST00000157695 110 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm6673-201ENSMUST00000166114 700 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm5558-201ENSMUST00000178933 495 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm8919-201ENSMUST00000182028 1014 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm9320-201ENSMUST00000184151 473 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm37884-201ENSMUST00000191857 818 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm44603-201ENSMUST00000206820 367 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm46369-201ENSMUST00000221577 401 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm7822-201ENSMUST00000222433 581 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.33□□□□□ -1.72
Nkx3-1P97436 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.33□□□□□ -1.72
Nkx3-1P97436 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm9577-201ENSMUST00000174655 2620 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm11196-201ENSMUST00000119052 395 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm25103-201ENSMUST00000122671 318 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm22804-201ENSMUST00000158052 101 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm21999-201ENSMUST00000165985 387 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm27688-201ENSMUST00000183634 91 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 148.6 ms