Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Rfx1P48377 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Rfx1P48377 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
Rfx1P48377 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Rfx1P48377 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Rfx1P48377 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Rfx1P48377 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Rfx1P48377 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC7.16□□□□□ -1.26
Rfx1P48377 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Rfx1P48377 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Rfx1P48377 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm42994-201ENSMUST00000195964 2549 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm14624-201ENSMUST00000117746 192 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Gm13811-201ENSMUST00000117800 256 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Gm6987-201ENSMUST00000119319 428 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Gm14982-201ENSMUST00000121102 442 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Gm12101-201ENSMUST00000121590 390 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Gm4789-201ENSMUST00000121708 1216 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Rfx1P48377 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Rfx1P48377 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm6541-201ENSMUST00000165542 561 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm7870-201ENSMUST00000184467 616 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC7.16□□□□□ -1.26
Rfx1P48377 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm37203-201ENSMUST00000191618 385 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Gm37774-201ENSMUST00000194401 245 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm3189-201ENSMUST00000205595 832 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm45127-201ENSMUST00000205984 1015 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Gm6702-201ENSMUST00000208496 471 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm9535-201ENSMUST00000218499 768 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Rfx1P48377 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Rfx1P48377 AC117237.1-201ENSMUST00000224035 395 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 AC160999.1-201ENSMUST00000225675 810 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 AC115735.5-201ENSMUST00000228386 397 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Rfx1P48377 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Rfx1P48377 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Rfx1P48377 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Rfx1P48377 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Rfx1P48377 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm44527-202ENSMUST00000204519 1314 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Rfx1P48377 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Rfx1P48377 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Rfx1P48377 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Rfx1P48377 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Rfx1P48377 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Rfx1P48377 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 CT025686.2-201ENSMUST00000227898 3315 ntBASIC7.16□□□□□ -1.26
Rfx1P48377 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Rfx1P48377 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC7.15□□□□□ -1.26
Rfx1P48377 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Rfx1P48377 Gm43360-201ENSMUST00000197656 2887 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Rfx1P48377 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Rfx1P48377 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Rfx1P48377 Gm37541-201ENSMUST00000192464 2315 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 Ear-ps2-201ENSMUST00000100689 466 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Rfx1P48377 Gm26146-201ENSMUST00000104478 185 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 n-R5s172-201ENSMUST00000104508 114 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Rfx1P48377 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Rfx1P48377 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Rfx1P48377 Gm14115-201ENSMUST00000119242 482 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 n-R5s207-201ENSMUST00000122497 118 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Rfx1P48377 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Rfx1P48377 Gm23981-201ENSMUST00000157136 106 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Rfx1P48377 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Rfx1P48377 Gm17030-201ENSMUST00000167016 393 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Rfx1P48377 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC7.15□□□□□ -1.26
Rfx1P48377 Gm5050-201ENSMUST00000197164 775 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 Gm42438-201ENSMUST00000197832 974 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC7.15□□□□□ -1.26
Rfx1P48377 Gm44634-201ENSMUST00000206119 152 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC7.15□□□□□ -1.26
Rfx1P48377 AC156832.3-201ENSMUST00000215591 435 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 AC069561.3-201ENSMUST00000217321 114 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms