Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 AC153532.1-201ENSMUST00000218126 1111 ntBASIC7.98□□□□□ -1.13
Col17a1Q07563 Gm34165-201ENSMUST00000222012 1174 ntBASIC7.98□□□□□ -1.13
Col17a1Q07563 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC7.98□□□□□ -1.13
Col17a1Q07563 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Col17a1Q07563 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Col17a1Q07563 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Col17a1Q07563 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col17a1Q07563 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Col17a1Q07563 Gm37846-201ENSMUST00000191840 3774 ntBASIC7.98□□□□□ -1.13
Col17a1Q07563 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Col17a1Q07563 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col17a1Q07563 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.97□□□□□ -1.13
Col17a1Q07563 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col17a1Q07563 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Col17a1Q07563 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Col17a1Q07563 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col17a1Q07563 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col17a1Q07563 AC154227.1-201ENSMUST00000228809 2467 ntBASIC7.97□□□□□ -1.13
Col17a1Q07563 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Col17a1Q07563 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col17a1Q07563 Gm25414-201ENSMUST00000101814 107 ntBASIC7.97□□□□□ -1.13
Col17a1Q07563 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC7.97□□□□□ -1.13
Col17a1Q07563 Gm15400-201ENSMUST00000118944 601 ntBASIC7.97□□□□□ -1.13
Col17a1Q07563 Defa-ps5-201ENSMUST00000121541 279 ntBASIC7.97□□□□□ -1.13
Col17a1Q07563 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC7.97□□□□□ -1.13
Col17a1Q07563 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC7.97□□□□□ -1.13
Col17a1Q07563 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC7.97□□□□□ -1.13
Col17a1Q07563 Gm9134-201ENSMUST00000193186 551 ntBASIC7.97□□□□□ -1.13
Col17a1Q07563 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC7.97□□□□□ -1.13
Col17a1Q07563 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC7.97□□□□□ -1.13
Col17a1Q07563 Gm18452-201ENSMUST00000202968 1111 ntBASIC7.97□□□□□ -1.13
Col17a1Q07563 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC7.97□□□□□ -1.13
Col17a1Q07563 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC7.97□□□□□ -1.13
Col17a1Q07563 Gm6562-201ENSMUST00000221903 464 ntBASIC7.97□□□□□ -1.13
Col17a1Q07563 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Col17a1Q07563 n-R5s65-201ENSMUST00000082614 117 ntBASIC7.97□□□□□ -1.13
Col17a1Q07563 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col17a1Q07563 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Col17a1Q07563 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Col17a1Q07563 Gm43613-201ENSMUST00000199409 1613 ntBASIC7.97□□□□□ -1.13
Col17a1Q07563 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Col17a1Q07563 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Col17a1Q07563 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Col17a1Q07563 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Col17a1Q07563 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC7.96□□□□□ -1.13
Col17a1Q07563 Gm45838-201ENSMUST00000207355 2447 ntBASIC7.96□□□□□ -1.13
Col17a1Q07563 AC154755.2-201ENSMUST00000224384 2857 ntBASIC7.96□□□□□ -1.13
Col17a1Q07563 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Col17a1Q07563 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC7.96□□□□□ -1.13
Col17a1Q07563 Gm5777-201ENSMUST00000177265 448 ntBASIC7.96□□□□□ -1.13
Col17a1Q07563 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
Col17a1Q07563 Gm4845-201ENSMUST00000179202 562 ntBASIC7.96□□□□□ -1.13
Col17a1Q07563 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col17a1Q07563 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC7.96□□□□□ -1.13
Col17a1Q07563 Gm38221-201ENSMUST00000195146 365 ntBASIC7.96□□□□□ -1.13
Col17a1Q07563 Gm5750-201ENSMUST00000218711 801 ntBASIC7.96□□□□□ -1.13
Col17a1Q07563 Gm3333-202ENSMUST00000221763 1044 ntBASIC7.96□□□□□ -1.13
Col17a1Q07563 AC187103.4-202ENSMUST00000225091 230 ntBASIC7.96□□□□□ -1.13
Col17a1Q07563 Gm10145-201ENSMUST00000077776 462 ntBASIC7.96□□□□□ -1.13
Col17a1Q07563 Gm24031-201ENSMUST00000083930 131 ntBASIC7.96□□□□□ -1.13
Col17a1Q07563 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
Col17a1Q07563 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
Col17a1Q07563 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col17a1Q07563 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
Col17a1Q07563 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col17a1Q07563 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col17a1Q07563 Gm44224-201ENSMUST00000204131 1463 ntBASIC7.96□□□□□ -1.14
Col17a1Q07563 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Col17a1Q07563 AC147639.2-202ENSMUST00000224834 1545 ntBASIC7.96□□□□□ -1.14
Col17a1Q07563 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC7.96□□□□□ -1.14
Col17a1Q07563 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
Col17a1Q07563 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col17a1Q07563 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col17a1Q07563 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC7.95□□□□□ -1.14
Col17a1Q07563 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col17a1Q07563 Mir669p-2-201ENSMUST00000103868 87 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Mir669p-1-201ENSMUST00000103884 87 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Gm24376-201ENSMUST00000104399 127 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Gm22497-201ENSMUST00000104499 131 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Gm14103-201ENSMUST00000119075 366 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Gm14067-201ENSMUST00000119340 314 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Gm16558-201ENSMUST00000163015 532 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Gm4832-201ENSMUST00000182679 399 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Mir6408-201ENSMUST00000183643 91 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Mir7022-201ENSMUST00000183749 61 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Gm3489-201ENSMUST00000190083 528 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Gm6140-201ENSMUST00000192494 966 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Gm37355-201ENSMUST00000193345 606 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Gm18748-201ENSMUST00000198507 622 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Gm45727-201ENSMUST00000212886 572 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 AC134254.4-201ENSMUST00000223086 370 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 AC154241.1-201ENSMUST00000223952 356 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col17a1Q07563 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Col17a1Q07563 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col17a1Q07563 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col17a1Q07563 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Gm38377-201ENSMUST00000193253 3772 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Col17a1Q07563 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms