Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Pcdh1F7BJK1 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm25093-201ENSMUST00000103993 132 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm13803-201ENSMUST00000117547 489 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm12230-201ENSMUST00000118301 454 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm14162-201ENSMUST00000121985 601 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm15840-201ENSMUST00000122099 943 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm23888-201ENSMUST00000122690 253 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm24628-201ENSMUST00000122761 289 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm16274-201ENSMUST00000139251 592 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm25667-201ENSMUST00000157701 275 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm3140-201ENSMUST00000163523 481 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm29551-201ENSMUST00000190913 698 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm18407-201ENSMUST00000192126 790 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm17934-201ENSMUST00000192818 422 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm5306-201ENSMUST00000203325 757 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm44254-201ENSMUST00000204184 322 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm6362-201ENSMUST00000217686 836 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm9535-201ENSMUST00000218499 768 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 AC152951.1-201ENSMUST00000218907 266 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 AC139376.1-201ENSMUST00000220056 1250 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 AC164295.1-201ENSMUST00000224861 186 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm22581-201ENSMUST00000083735 136 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm24490-201ENSMUST00000083803 98 ntBASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Pcdh1F7BJK1 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 AC115891.1-201ENSMUST00000215798 1755 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Mir466i-201ENSMUST00000116924 121 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm12268-201ENSMUST00000118398 442 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm15312-201ENSMUST00000118827 271 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm13818-201ENSMUST00000119441 511 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm8430-201ENSMUST00000119780 471 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm15309-201ENSMUST00000121644 240 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm12175-201ENSMUST00000122081 345 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm5924-201ENSMUST00000132554 871 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms