Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Gm27044-201ENSMUST00000183033 796 ntBASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Gm28660-201ENSMUST00000186496 253 ntBASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Gm37681-201ENSMUST00000193880 727 ntBASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Gm18952-201ENSMUST00000194471 846 ntBASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.08□□□□□ -1.6
Vps39Q8R5L3 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Gm45422-201ENSMUST00000211476 246 ntBASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Gm6991-201ENSMUST00000218475 1178 ntBASIC5.08□□□□□ -1.6
Vps39Q8R5L3 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC5.08□□□□□ -1.6
Vps39Q8R5L3 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.08□□□□□ -1.6
Vps39Q8R5L3 AC154838.2-201ENSMUST00000226602 747 ntBASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Mir449a-201ENSMUST00000083641 91 ntBASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Vps39Q8R5L3 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm12039-201ENSMUST00000118219 180 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm11325-201ENSMUST00000119967 469 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm14655-201ENSMUST00000120124 578 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm13162-201ENSMUST00000121481 454 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm22730-201ENSMUST00000158085 171 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm23116-201ENSMUST00000158481 67 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Mir7687-201ENSMUST00000184722 59 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28604-201ENSMUST00000186629 484 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28566-201ENSMUST00000186714 484 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28194-201ENSMUST00000187412 484 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28886-202ENSMUST00000187889 484 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28468-201ENSMUST00000188536 615 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28554-202ENSMUST00000189175 484 ntBASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps39Q8R5L3 Gm29213-202ENSMUST00000189703 484 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms