Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.1□□□□□ -1.43
Sox9Q04887 Gm29184-201ENSMUST00000190038 334 ntBASIC6.1□□□□□ -1.43
Sox9Q04887 Gm29551-201ENSMUST00000190913 698 ntBASIC6.1□□□□□ -1.43
Sox9Q04887 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Sox9Q04887 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.1□□□□□ -1.43
Sox9Q04887 Gm45034-201ENSMUST00000206831 482 ntBASIC6.1□□□□□ -1.43
Sox9Q04887 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.1□□□□□ -1.43
Sox9Q04887 AL935138.1-201ENSMUST00000215309 196 ntBASIC6.1□□□□□ -1.43
Sox9Q04887 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC6.1□□□□□ -1.43
Sox9Q04887 AC123062.1-201ENSMUST00000221287 481 ntBASIC6.1□□□□□ -1.43
Sox9Q04887 Vmn1r89-206ENSMUST00000227319 985 ntBASIC6.1□□□□□ -1.43
Sox9Q04887 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox9Q04887 Gm24405-201ENSMUST00000083033 167 ntBASIC6.1□□□□□ -1.43
Sox9Q04887 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sox9Q04887 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sox9Q04887 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.1□□□□□ -1.43
Sox9Q04887 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sox9Q04887 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox9Q04887 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sox9Q04887 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sox9Q04887 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sox9Q04887 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Sox9Q04887 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox9Q04887 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC6.1□□□□□ -1.43
Sox9Q04887 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox9Q04887 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Sox9Q04887 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sox9Q04887 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox9Q04887 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sox9Q04887 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox9Q04887 Gm26146-201ENSMUST00000104478 185 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox9Q04887 Gm16373-201ENSMUST00000129517 303 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox9Q04887 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox9Q04887 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox9Q04887 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sox9Q04887 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC6.09□□□□□ -1.43
Sox9Q04887 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC6.09□□□□□ -1.43
Sox9Q04887 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 Gm9457-201ENSMUST00000180176 372 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox9Q04887 Gm26968-201ENSMUST00000182894 481 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 Gm27286-201ENSMUST00000184934 179 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 Gm3496-201ENSMUST00000188283 745 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 Gm18150-201ENSMUST00000195341 645 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox9Q04887 Gm44048-201ENSMUST00000204531 361 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 Gm45070-201ENSMUST00000208100 246 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 Gm9655-201ENSMUST00000211321 1284 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC6.09□□□□□ -1.43
Sox9Q04887 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.09□□□□□ -1.43
Sox9Q04887 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox9Q04887 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.09□□□□□ -1.43
Sox9Q04887 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
Sox9Q04887 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.09□□□□□ -1.43
Sox9Q04887 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox9Q04887 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC6.09□□□□□ -1.43
Sox9Q04887 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sox9Q04887 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sox9Q04887 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sox9Q04887 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sox9Q04887 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sox9Q04887 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox9Q04887 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Sox9Q04887 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox9Q04887 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox9Q04887 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox9Q04887 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox9Q04887 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox9Q04887 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Sox9Q04887 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Sox9Q04887 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.09□□□□□ -1.44
Sox9Q04887 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Sox9Q04887 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Sox9Q04887 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox9Q04887 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox9Q04887 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.08□□□□□ -1.44
Sox9Q04887 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox9Q04887 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sox9Q04887 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox9Q04887 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.08□□□□□ -1.44
Sox9Q04887 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox9Q04887 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sox9Q04887 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sox9Q04887 Gm2348-201ENSMUST00000108782 300 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 Gm12598-201ENSMUST00000117333 830 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Sox9Q04887 Gm16458-201ENSMUST00000121428 502 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 Klra11-ps-201ENSMUST00000122033 810 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 Gm15885-201ENSMUST00000122114 388 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 Gm22276-201ENSMUST00000122469 129 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.08□□□□□ -1.44
Sox9Q04887 Gm10319-202ENSMUST00000159439 846 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 111.6 ms