Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC5□□□□□ -1.61
HttP42859 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC5□□□□□ -1.61
HttP42859 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC5□□□□□ -1.61
HttP42859 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5□□□□□ -1.61
HttP42859 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
HttP42859 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HttP42859 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HttP42859 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HttP42859 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HttP42859 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HttP42859 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HttP42859 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HttP42859 Gm23294-201ENSMUST00000104150 164 ntBASIC4.99□□□□□ -1.61
HttP42859 Gm7634-201ENSMUST00000185778 553 ntBASIC4.99□□□□□ -1.61
HttP42859 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.99□□□□□ -1.61
HttP42859 AC110816.1-201ENSMUST00000218559 980 ntBASIC4.99□□□□□ -1.61
HttP42859 Ank2-201ENSMUST00000044443 5775 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HttP42859 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HttP42859 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
HttP42859 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HttP42859 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.99□□□□□ -1.61
HttP42859 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HttP42859 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HttP42859 AC156636.1-201ENSMUST00000218639 2229 ntBASIC4.99□□□□□ -1.61
HttP42859 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HttP42859 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC4.99□□□□□ -1.61
HttP42859 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC4.99□□□□□ -1.61
HttP42859 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HttP42859 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HttP42859 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HttP42859 Gm45112-201ENSMUST00000208576 5125 ntBASIC4.99□□□□□ -1.61
HttP42859 Gm22816-201ENSMUST00000157450 117 ntBASIC4.99□□□□□ -1.61
HttP42859 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.99□□□□□ -1.61
HttP42859 Spin2g-201ENSMUST00000178425 687 ntBASIC4.99□□□□□ -1.61
HttP42859 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.99□□□□□ -1.61
HttP42859 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HttP42859 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HttP42859 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HttP42859 AC124579.1-201ENSMUST00000223468 2520 ntBASIC4.99□□□□□ -1.61
HttP42859 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
HttP42859 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HttP42859 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.99□□□□□ -1.61
HttP42859 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HttP42859 Gm12379-201ENSMUST00000119607 391 ntBASIC4.99□□□□□ -1.61
HttP42859 Gm22718-201ENSMUST00000122701 315 ntBASIC4.99□□□□□ -1.61
HttP42859 Gm25386-201ENSMUST00000157814 288 ntBASIC4.99□□□□□ -1.61
HttP42859 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HttP42859 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.99□□□□□ -1.61
HttP42859 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.99□□□□□ -1.61
HttP42859 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.99□□□□□ -1.61
HttP42859 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
HttP42859 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.99□□□□□ -1.61
HttP42859 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HttP42859 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HttP42859 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HttP42859 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.98□□□□□ -1.61
HttP42859 Gm23709-201ENSMUST00000104364 130 ntBASIC4.98□□□□□ -1.61
HttP42859 Gm11781-201ENSMUST00000118328 472 ntBASIC4.98□□□□□ -1.61
HttP42859 Gm14282-201ENSMUST00000119484 240 ntBASIC4.98□□□□□ -1.61
HttP42859 Gm42983-201ENSMUST00000199879 815 ntBASIC4.98□□□□□ -1.61
HttP42859 Gm45727-201ENSMUST00000212886 572 ntBASIC4.98□□□□□ -1.61
HttP42859 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.98□□□□□ -1.61
HttP42859 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HttP42859 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HttP42859 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HttP42859 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HttP42859 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HttP42859 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HttP42859 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HttP42859 Mir1251-201ENSMUST00000175486 84 ntBASIC4.98□□□□□ -1.61
HttP42859 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.98□□□□□ -1.61
HttP42859 Gm29592-201ENSMUST00000189434 370 ntBASIC4.98□□□□□ -1.61
HttP42859 Gm38061-201ENSMUST00000192490 365 ntBASIC4.98□□□□□ -1.61
HttP42859 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.98□□□□□ -1.61
HttP42859 Gm45553-201ENSMUST00000209929 507 ntBASIC4.98□□□□□ -1.61
HttP42859 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HttP42859 Gm5185-201ENSMUST00000080271 619 ntBASIC4.98□□□□□ -1.61
HttP42859 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HttP42859 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
HttP42859 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HttP42859 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
HttP42859 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.97□□□□□ -1.61
HttP42859 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.97□□□□□ -1.61
HttP42859 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.97□□□□□ -1.61
HttP42859 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
HttP42859 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Gm13132-201ENSMUST00000121194 472 ntBASIC4.97□□□□□ -1.61
HttP42859 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.97□□□□□ -1.61
HttP42859 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
HttP42859 Gm4557-201ENSMUST00000185826 907 ntBASIC4.97□□□□□ -1.61
HttP42859 Gm8708-201ENSMUST00000188500 906 ntBASIC4.97□□□□□ -1.61
HttP42859 Gm22897-202ENSMUST00000197782 127 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms