Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.05□□□□□ -1.76
Sdc1P18828 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC4.05□□□□□ -1.76
Sdc1P18828 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.05□□□□□ -1.76
Sdc1P18828 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC4.05□□□□□ -1.76
Sdc1P18828 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC4.05□□□□□ -1.76
Sdc1P18828 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC4.05□□□□□ -1.76
Sdc1P18828 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC4.05□□□□□ -1.76
Sdc1P18828 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
Sdc1P18828 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Sdc1P18828 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.05□□□□□ -1.76
Sdc1P18828 AC114008.1-201ENSMUST00000226193 937 ntBASIC4.05□□□□□ -1.76
Sdc1P18828 AC137871.3-201ENSMUST00000226628 225 ntBASIC4.05□□□□□ -1.76
Sdc1P18828 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Sdc1P18828 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Sdc1P18828 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Sdc1P18828 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Sdc1P18828 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Sdc1P18828 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Sdc1P18828 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Sdc1P18828 Gm44235-201ENSMUST00000204312 3058 ntBASIC4.05□□□□□ -1.76
Sdc1P18828 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Sdc1P18828 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.05□□□□□ -1.76
Sdc1P18828 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.04□□□□□ -1.76
Sdc1P18828 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Sdc1P18828 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Sdc1P18828 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm11409-201ENSMUST00000118621 403 ntBASIC4.04□□□□□ -1.76
Sdc1P18828 Gm4989-201ENSMUST00000118711 749 ntBASIC4.04□□□□□ -1.76
Sdc1P18828 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm14106-201ENSMUST00000119382 438 ntBASIC4.04□□□□□ -1.76
Sdc1P18828 Gm12379-201ENSMUST00000119607 391 ntBASIC4.04□□□□□ -1.76
Sdc1P18828 Gm14489-201ENSMUST00000120868 901 ntBASIC4.04□□□□□ -1.76
Sdc1P18828 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Sdc1P18828 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm11962-201ENSMUST00000145746 255 ntBASIC4.04□□□□□ -1.76
Sdc1P18828 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm17421-201ENSMUST00000167845 674 ntBASIC4.04□□□□□ -1.76
Sdc1P18828 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Sdc1P18828 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC4.04□□□□□ -1.76
Sdc1P18828 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm37884-201ENSMUST00000191857 818 ntBASIC4.04□□□□□ -1.76
Sdc1P18828 Gm37932-201ENSMUST00000192258 1167 ntBASIC4.04□□□□□ -1.76
Sdc1P18828 Gm37809-201ENSMUST00000195050 931 ntBASIC4.04□□□□□ -1.76
Sdc1P18828 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Sdc1P18828 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm32536-201ENSMUST00000205209 445 ntBASIC4.04□□□□□ -1.76
Sdc1P18828 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC4.04□□□□□ -1.76
Sdc1P18828 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Sdc1P18828 AL837512.1-201ENSMUST00000223914 1073 ntBASIC4.04□□□□□ -1.76
Sdc1P18828 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Sdc1P18828 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Sdc1P18828 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Sdc1P18828 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Sdc1P18828 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Sdc1P18828 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Sdc1P18828 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Sdc1P18828 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Sdc1P18828 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.04□□□□□ -1.76
Sdc1P18828 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Sdc1P18828 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Sdc1P18828 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
Sdc1P18828 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Sdc1P18828 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Sdc1P18828 Ear-ps2-201ENSMUST00000100689 466 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.03□□□□□ -1.76
Sdc1P18828 Gm11271-201ENSMUST00000116054 440 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Sdc1P18828 Gm16205-201ENSMUST00000117720 1027 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 H3f3c-201ENSMUST00000119459 411 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Gm15331-201ENSMUST00000120225 385 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Mup-ps28-201ENSMUST00000120686 289 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Gm11472-201ENSMUST00000121305 556 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Gm15388-201ENSMUST00000121578 726 ntBASIC4.03□□□□□ -1.76
Sdc1P18828 Gm15164-201ENSMUST00000122203 271 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms