Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Thap6-201ENSMUST00000191860 3151 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm8250-201ENSMUST00000117398 774 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm11862-201ENSMUST00000119678 659 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm6587-201ENSMUST00000120219 613 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm12630-201ENSMUST00000121575 784 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Sms-ps-201ENSMUST00000121773 1101 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm27006-201ENSMUST00000182218 943 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm27342-201ENSMUST00000183530 109 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm17946-201ENSMUST00000186856 538 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm19280-201ENSMUST00000190191 205 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm37475-201ENSMUST00000193107 1015 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm20926-201ENSMUST00000194457 696 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm43026-201ENSMUST00000202972 325 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm44857-201ENSMUST00000208331 196 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm19599-201ENSMUST00000218898 358 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm35558-203ENSMUST00000222264 204 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm23404-201ENSMUST00000082543 97 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm24764-201ENSMUST00000083686 199 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm37216-201ENSMUST00000193817 3478 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm43612-201ENSMUST00000196087 3207 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 AC139941.2-201ENSMUST00000221565 1824 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 AC154406.1-201ENSMUST00000215220 2529 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm24069-201ENSMUST00000104512 127 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm15901-201ENSMUST00000117663 941 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm14594-201ENSMUST00000118052 537 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm14590-201ENSMUST00000118934 537 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm12646-201ENSMUST00000119144 238 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm14998-201ENSMUST00000120502 495 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm15502-201ENSMUST00000121449 208 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm25342-201ENSMUST00000157459 122 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm23632-201ENSMUST00000175289 125 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm14596-201ENSMUST00000180268 537 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm14595-201ENSMUST00000180335 537 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm27699-201ENSMUST00000183553 180 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm29332-201ENSMUST00000190829 227 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm37492-201ENSMUST00000191948 376 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm37455-201ENSMUST00000191993 529 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm6105-201ENSMUST00000200580 624 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm43976-201ENSMUST00000203637 235 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm44687-201ENSMUST00000204975 235 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 AC157085.1-201ENSMUST00000216343 162 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 AC122448.1-201ENSMUST00000226317 772 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 AC117588.2-201ENSMUST00000228340 311 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms