Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm6584-201ENSMUST00000119671 447 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm13232-201ENSMUST00000121816 632 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm11360-201ENSMUST00000221898 262 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Snord22-201ENSMUST00000083153 126 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 AC118639.1-203ENSMUST00000228425 2016 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm23178-201ENSMUST00000116782 95 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm14753-201ENSMUST00000118503 246 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm13503-201ENSMUST00000119017 446 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm16106-201ENSMUST00000119187 294 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm22211-201ENSMUST00000158097 156 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm43604-201ENSMUST00000199799 705 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm33626-201ENSMUST00000206790 828 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 AC153516.1-201ENSMUST00000217955 779 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.12□□□□□ -1.59
Col4a6B1AVK5 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.12□□□□□ -1.59
Col4a6B1AVK5 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Gm43953-201ENSMUST00000203709 2867 ntBASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Gm13220-201ENSMUST00000121535 508 ntBASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Gm24961-201ENSMUST00000157918 184 ntBASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Gm45226-201ENSMUST00000206602 288 ntBASIC5.11□□□□□ -1.59
Col4a6B1AVK5 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Gm6988-201ENSMUST00000222676 375 ntBASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col4a6B1AVK5 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.1□□□□□ -1.59
Col4a6B1AVK5 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col4a6B1AVK5 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Gm11409-201ENSMUST00000118621 403 ntBASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Gm16463-201ENSMUST00000120527 721 ntBASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Gm24689-201ENSMUST00000157760 104 ntBASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Mir7022-201ENSMUST00000183749 61 ntBASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Gm37492-201ENSMUST00000191948 376 ntBASIC5.1□□□□□ -1.59
Col4a6B1AVK5 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms