Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5538W4VSP6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5538W4VSP6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5538W4VSP6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.05■□□□□ 0.48
Gm5538W4VSP6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Gm5538W4VSP6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.05■□□□□ 0.48
Gm5538W4VSP6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5538W4VSP6 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.05■□□□□ 0.48
Gm5538W4VSP6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5538W4VSP6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm5538W4VSP6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5538W4VSP6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Gm5643-201ENSMUST00000117081 966 ntBASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Mir6349-201ENSMUST00000184059 97 ntBASIC18.04■□□□□ 0.48
Gm5538W4VSP6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5538W4VSP6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Gm10698-201ENSMUST00000182663 604 ntBASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Gm18025-201ENSMUST00000221733 862 ntBASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.03■□□□□ 0.48
Gm5538W4VSP6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5538W4VSP6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5538W4VSP6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5538W4VSP6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5538W4VSP6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5538W4VSP6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5538W4VSP6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.02■□□□□ 0.48
Gm5538W4VSP6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5538W4VSP6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5538W4VSP6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Gm5538W4VSP6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.02■□□□□ 0.48
Gm5538W4VSP6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Gm5538W4VSP6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5538W4VSP6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.02■□□□□ 0.48
Gm5538W4VSP6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5538W4VSP6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5538W4VSP6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Gm5538W4VSP6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Gm5538W4VSP6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm5538W4VSP6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5538W4VSP6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm5538W4VSP6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm5538W4VSP6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Gm5538W4VSP6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Gm5538W4VSP6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms