Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn9Q9Z0S7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn9Q9Z0S7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn9Q9Z0S7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn9Q9Z0S7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn9Q9Z0S7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn9Q9Z0S7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn9Q9Z0S7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.02■□□□□ 0.32
Cldn9Q9Z0S7 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.02■□□□□ 0.32
Cldn9Q9Z0S7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.02■□□□□ 0.32
Cldn9Q9Z0S7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn9Q9Z0S7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn9Q9Z0S7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn9Q9Z0S7 Gm4968-201ENSMUST00000071458 858 ntBASIC17.02■□□□□ 0.32
Cldn9Q9Z0S7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn9Q9Z0S7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn9Q9Z0S7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn9Q9Z0S7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.02■□□□□ 0.31
Cldn9Q9Z0S7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn9Q9Z0S7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn9Q9Z0S7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Cldn9Q9Z0S7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn9Q9Z0S7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.01■□□□□ 0.31
Cldn9Q9Z0S7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Cldn9Q9Z0S7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn9Q9Z0S7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn9Q9Z0S7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn9Q9Z0S7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn9Q9Z0S7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn9Q9Z0S7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn9Q9Z0S7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn9Q9Z0S7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn9Q9Z0S7 Gm10418-201ENSMUST00000100943 576 ntBASIC17.01■□□□□ 0.31
Cldn9Q9Z0S7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn9Q9Z0S7 Gm29791-202ENSMUST00000207888 369 ntBASIC17.01■□□□□ 0.31
Cldn9Q9Z0S7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn9Q9Z0S7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn9Q9Z0S7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cldn9Q9Z0S7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldn9Q9Z0S7 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms