Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Gm13401-201ENSMUST00000117074 291 ntBASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip2Q9Z0H8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Clip2Q9Z0H8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.56■□□□□ 0.88
Clip2Q9Z0H8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.56■□□□□ 0.88
Clip2Q9Z0H8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip2Q9Z0H8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.56■□□□□ 0.88
Clip2Q9Z0H8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.56■□□□□ 0.88
Clip2Q9Z0H8 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.56■□□□□ 0.88
Clip2Q9Z0H8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip2Q9Z0H8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip2Q9Z0H8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Clip2Q9Z0H8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Clip2Q9Z0H8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip2Q9Z0H8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip2Q9Z0H8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Clip2Q9Z0H8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.54■□□□□ 0.88
Clip2Q9Z0H8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip2Q9Z0H8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clip2Q9Z0H8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Clip2Q9Z0H8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.54■□□□□ 0.88
Clip2Q9Z0H8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Clip2Q9Z0H8 Odf3b-204ENSMUST00000227834 930 ntBASIC20.54■□□□□ 0.88
Clip2Q9Z0H8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip2Q9Z0H8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Clip2Q9Z0H8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Clip2Q9Z0H8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip2Q9Z0H8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip2Q9Z0H8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.54■□□□□ 0.88
Clip2Q9Z0H8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Gm4974-201ENSMUST00000209974 875 ntBASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip2Q9Z0H8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip2Q9Z0H8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Clip2Q9Z0H8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip2Q9Z0H8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip2Q9Z0H8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip2Q9Z0H8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip2Q9Z0H8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip2Q9Z0H8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clip2Q9Z0H8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.52■□□□□ 0.88
Clip2Q9Z0H8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.52■□□□□ 0.88
Clip2Q9Z0H8 Gm12085-201ENSMUST00000119263 940 ntBASIC20.52■□□□□ 0.88
Clip2Q9Z0H8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip2Q9Z0H8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clip2Q9Z0H8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clip2Q9Z0H8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip2Q9Z0H8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip2Q9Z0H8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Clip2Q9Z0H8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms