Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ClcnkaQ9WUB7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ClcnkaQ9WUB7 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.28■□□□□ 0.2
ClcnkaQ9WUB7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ClcnkaQ9WUB7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ClcnkaQ9WUB7 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.28■□□□□ 0.2
ClcnkaQ9WUB7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.28■□□□□ 0.2
ClcnkaQ9WUB7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.28■□□□□ 0.2
ClcnkaQ9WUB7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ClcnkaQ9WUB7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ClcnkaQ9WUB7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ClcnkaQ9WUB7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.28■□□□□ 0.2
ClcnkaQ9WUB7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ClcnkaQ9WUB7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ClcnkaQ9WUB7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ClcnkaQ9WUB7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 Gm38285-201ENSMUST00000192928 922 ntBASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 Zfp783-201ENSMUST00000095946 670 ntBASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ClcnkaQ9WUB7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ClcnkaQ9WUB7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ClcnkaQ9WUB7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ClcnkaQ9WUB7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ClcnkaQ9WUB7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.27■□□□□ 0.19
ClcnkaQ9WUB7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Gm12896-201ENSMUST00000118430 226 ntBASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ClcnkaQ9WUB7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ClcnkaQ9WUB7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ClcnkaQ9WUB7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ClcnkaQ9WUB7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ClcnkaQ9WUB7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ClcnkaQ9WUB7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ClcnkaQ9WUB7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ClcnkaQ9WUB7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ClcnkaQ9WUB7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ClcnkaQ9WUB7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ClcnkaQ9WUB7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ClcnkaQ9WUB7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
ClcnkaQ9WUB7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ClcnkaQ9WUB7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Gm11927-201ENSMUST00000118472 759 ntBASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Dio3-201ENSMUST00000097228 1449 ntBASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ClcnkaQ9WUB7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms