Protein–RNA interactions for Protein: Q9WU72

Tnfsf13b, Tumor necrosis factor ligand superfamily member 13B, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf13bQ9WU72 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Tnfsf13bQ9WU72 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf13bQ9WU72 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.18■□□□□ 0.66
Tnfsf13bQ9WU72 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf13bQ9WU72 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf13bQ9WU72 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf13bQ9WU72 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tnfsf13bQ9WU72 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf13bQ9WU72 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Tnfsf13bQ9WU72 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Tnfsf13bQ9WU72 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf13bQ9WU72 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf13bQ9WU72 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf13bQ9WU72 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf13bQ9WU72 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf13bQ9WU72 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf13bQ9WU72 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf13bQ9WU72 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf13bQ9WU72 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf13bQ9WU72 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Tnfsf13bQ9WU72 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Tnfsf13bQ9WU72 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf13bQ9WU72 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.17■□□□□ 0.66
Tnfsf13bQ9WU72 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.17■□□□□ 0.66
Tnfsf13bQ9WU72 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.17■□□□□ 0.66
Tnfsf13bQ9WU72 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Tnfsf13bQ9WU72 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf13bQ9WU72 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Tnfsf13bQ9WU72 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf13bQ9WU72 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfsf13bQ9WU72 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfsf13bQ9WU72 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfsf13bQ9WU72 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.16■□□□□ 0.66
Tnfsf13bQ9WU72 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfsf13bQ9WU72 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.16■□□□□ 0.66
Tnfsf13bQ9WU72 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tnfsf13bQ9WU72 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfsf13bQ9WU72 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tnfsf13bQ9WU72 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfsf13bQ9WU72 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf13bQ9WU72 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Tnfsf13bQ9WU72 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Gm10231-201ENSMUST00000181584 441 ntBASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Gm27463-201ENSMUST00000183569 57 ntBASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Mir8112-201ENSMUST00000184382 131 ntBASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Gm7889-201ENSMUST00000185591 958 ntBASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Gm10175-202ENSMUST00000208752 441 ntBASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf13bQ9WU72 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms