Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh17Q9R100 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh17Q9R100 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh17Q9R100 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh17Q9R100 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh17Q9R100 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh17Q9R100 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh17Q9R100 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh17Q9R100 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh17Q9R100 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh17Q9R100 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh17Q9R100 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh17Q9R100 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh17Q9R100 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.26■□□□□ 0.35
Cdh17Q9R100 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.26■□□□□ 0.35
Cdh17Q9R100 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh17Q9R100 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh17Q9R100 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.26■□□□□ 0.35
Cdh17Q9R100 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.26■□□□□ 0.35
Cdh17Q9R100 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh17Q9R100 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh17Q9R100 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cdh17Q9R100 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh17Q9R100 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh17Q9R100 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh17Q9R100 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh17Q9R100 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.25■□□□□ 0.35
Cdh17Q9R100 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh17Q9R100 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh17Q9R100 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh17Q9R100 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh17Q9R100 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh17Q9R100 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cdh17Q9R100 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Cdh17Q9R100 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh17Q9R100 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh17Q9R100 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh17Q9R100 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh17Q9R100 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh17Q9R100 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdh17Q9R100 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh17Q9R100 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.24■□□□□ 0.35
Cdh17Q9R100 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Mir8112-201ENSMUST00000184382 131 ntBASIC17.24■□□□□ 0.35
Cdh17Q9R100 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh17Q9R100 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.24■□□□□ 0.35
Cdh17Q9R100 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh17Q9R100 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh17Q9R100 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh17Q9R100 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.23■□□□□ 0.35
Cdh17Q9R100 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh17Q9R100 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh17Q9R100 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cdh17Q9R100 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Cdh17Q9R100 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh17Q9R100 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Cdh17Q9R100 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.23■□□□□ 0.35
Cdh17Q9R100 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.23■□□□□ 0.35
Cdh17Q9R100 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh17Q9R100 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh17Q9R100 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.23■□□□□ 0.35
Cdh17Q9R100 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh17Q9R100 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.23■□□□□ 0.35
Cdh17Q9R100 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.22■□□□□ 0.35
Cdh17Q9R100 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh17Q9R100 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh17Q9R100 Gm8495-201ENSMUST00000188740 694 ntBASIC17.22■□□□□ 0.35
Cdh17Q9R100 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh17Q9R100 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.22■□□□□ 0.35
Cdh17Q9R100 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cdh17Q9R100 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh17Q9R100 Flg-201ENSMUST00000050758 1488 ntBASIC17.22■□□□□ 0.35
Cdh17Q9R100 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh17Q9R100 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh17Q9R100 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cdh17Q9R100 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh17Q9R100 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh17Q9R100 Gm10418-201ENSMUST00000100943 576 ntBASIC17.21■□□□□ 0.35
Cdh17Q9R100 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.21■□□□□ 0.35
Cdh17Q9R100 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.21■□□□□ 0.35
Cdh17Q9R100 Mir2861-201ENSMUST00000175539 82 ntBASIC17.21■□□□□ 0.35
Cdh17Q9R100 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh17Q9R100 Rab3c-203ENSMUST00000224180 967 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms