Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Mir8112-201ENSMUST00000184382 131 ntBASIC18.72■□□□□ 0.59
Rfx5Q9JL61 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.72■□□□□ 0.59
Rfx5Q9JL61 Gm10252-201ENSMUST00000209541 832 ntBASIC18.72■□□□□ 0.59
Rfx5Q9JL61 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx5Q9JL61 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx5Q9JL61 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx5Q9JL61 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rfx5Q9JL61 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx5Q9JL61 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx5Q9JL61 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx5Q9JL61 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.69■□□□□ 0.58
Rfx5Q9JL61 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx5Q9JL61 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx5Q9JL61 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx5Q9JL61 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx5Q9JL61 Gm4974-201ENSMUST00000209974 875 ntBASIC18.69■□□□□ 0.58
Rfx5Q9JL61 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx5Q9JL61 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx5Q9JL61 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.69■□□□□ 0.58
Rfx5Q9JL61 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx5Q9JL61 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx5Q9JL61 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx5Q9JL61 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx5Q9JL61 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx5Q9JL61 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rfx5Q9JL61 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx5Q9JL61 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx5Q9JL61 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx5Q9JL61 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx5Q9JL61 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rfx5Q9JL61 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx5Q9JL61 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx5Q9JL61 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.68■□□□□ 0.58
Rfx5Q9JL61 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.68■□□□□ 0.58
Rfx5Q9JL61 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.68■□□□□ 0.58
Rfx5Q9JL61 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rfx5Q9JL61 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx5Q9JL61 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx5Q9JL61 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.68■□□□□ 0.58
Rfx5Q9JL61 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx5Q9JL61 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx5Q9JL61 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Mir5122-201ENSMUST00000175004 89 ntBASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.67■□□□□ 0.58
Rfx5Q9JL61 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx5Q9JL61 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.66■□□□□ 0.58
Rfx5Q9JL61 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms