Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1fQ9JIS7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1fQ9JIS7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.19■□□□□ 0.82
Cacna1fQ9JIS7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.19■□□□□ 0.82
Cacna1fQ9JIS7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1fQ9JIS7 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1fQ9JIS7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1fQ9JIS7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1fQ9JIS7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1fQ9JIS7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.19■□□□□ 0.82
Cacna1fQ9JIS7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1fQ9JIS7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1fQ9JIS7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cacna1fQ9JIS7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1fQ9JIS7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Cacna1fQ9JIS7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1fQ9JIS7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1fQ9JIS7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1fQ9JIS7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1fQ9JIS7 Gm11950-201ENSMUST00000121615 838 ntBASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Gm37722-201ENSMUST00000193757 208 ntBASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Gm21559-201ENSMUST00000220638 855 ntBASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Gm8587-201ENSMUST00000076538 843 ntBASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Gm27357-201ENSMUST00000183754 135 ntBASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1fQ9JIS7 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.16■□□□□ 0.82
Cacna1fQ9JIS7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1fQ9JIS7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1fQ9JIS7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1fQ9JIS7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1fQ9JIS7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.16■□□□□ 0.82
Cacna1fQ9JIS7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1fQ9JIS7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1fQ9JIS7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cacna1fQ9JIS7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1fQ9JIS7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.16■□□□□ 0.82
Cacna1fQ9JIS7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cacna1fQ9JIS7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1fQ9JIS7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1fQ9JIS7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1fQ9JIS7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1fQ9JIS7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Cacna1fQ9JIS7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1fQ9JIS7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1fQ9JIS7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.15■□□□□ 0.82
Cacna1fQ9JIS7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1fQ9JIS7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1fQ9JIS7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1fQ9JIS7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1fQ9JIS7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1fQ9JIS7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1fQ9JIS7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cacna1fQ9JIS7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1fQ9JIS7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Cacna1fQ9JIS7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.82
Cacna1fQ9JIS7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cacna1fQ9JIS7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Cacna1fQ9JIS7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
Cacna1fQ9JIS7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cacna1fQ9JIS7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Cacna1fQ9JIS7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cacna1fQ9JIS7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cacna1fQ9JIS7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cacna1fQ9JIS7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.14■□□□□ 0.81
Cacna1fQ9JIS7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.14■□□□□ 0.81
Cacna1fQ9JIS7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.14■□□□□ 0.81
Cacna1fQ9JIS7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.14■□□□□ 0.81
Cacna1fQ9JIS7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Cacna1fQ9JIS7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1fQ9JIS7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Cacna1fQ9JIS7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.13■□□□□ 0.81
Cacna1fQ9JIS7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1fQ9JIS7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1fQ9JIS7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Cacna1fQ9JIS7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1fQ9JIS7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1fQ9JIS7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Cacna1fQ9JIS7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1fQ9JIS7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cacna1fQ9JIS7 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.13■□□□□ 0.81
Cacna1fQ9JIS7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1fQ9JIS7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Cacna1fQ9JIS7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1fQ9JIS7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms