Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ClpxQ9JHS4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ClpxQ9JHS4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ClpxQ9JHS4 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.18■□□□□ 0.18
ClpxQ9JHS4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ClpxQ9JHS4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ClpxQ9JHS4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClpxQ9JHS4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClpxQ9JHS4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClpxQ9JHS4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClpxQ9JHS4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ClpxQ9JHS4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClpxQ9JHS4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ClpxQ9JHS4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ClpxQ9JHS4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClpxQ9JHS4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClpxQ9JHS4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClpxQ9JHS4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Gm38205-201ENSMUST00000192243 258 ntBASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClpxQ9JHS4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClpxQ9JHS4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClpxQ9JHS4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ClpxQ9JHS4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClpxQ9JHS4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ClpxQ9JHS4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ClpxQ9JHS4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ClpxQ9JHS4 Gm7514-201ENSMUST00000209475 934 ntBASIC16.15■□□□□ 0.18
ClpxQ9JHS4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClpxQ9JHS4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClpxQ9JHS4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClpxQ9JHS4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClpxQ9JHS4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClpxQ9JHS4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClpxQ9JHS4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClpxQ9JHS4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ClpxQ9JHS4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClpxQ9JHS4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ClpxQ9JHS4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ClpxQ9JHS4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ClpxQ9JHS4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ClpxQ9JHS4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.14■□□□□ 0.17
ClpxQ9JHS4 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.14■□□□□ 0.17
ClpxQ9JHS4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ClpxQ9JHS4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ClpxQ9JHS4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ClpxQ9JHS4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ClpxQ9JHS4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ClpxQ9JHS4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ClpxQ9JHS4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ClpxQ9JHS4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ClpxQ9JHS4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ClpxQ9JHS4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms