Protein–RNA interactions for Protein: Q9JHB3

Timp4, Metalloproteinase inhibitor 4, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp4Q9JHB3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Timp4Q9JHB3 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.41■□□□□ 0.54
Timp4Q9JHB3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Gm6433-201ENSMUST00000118634 875 ntBASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Gm13836-201ENSMUST00000121159 501 ntBASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp4Q9JHB3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.4■□□□□ 0.54
Timp4Q9JHB3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Timp4Q9JHB3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Timp4Q9JHB3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Timp4Q9JHB3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Timp4Q9JHB3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Timp4Q9JHB3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.39■□□□□ 0.53
Timp4Q9JHB3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.39■□□□□ 0.53
Timp4Q9JHB3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Timp4Q9JHB3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Timp4Q9JHB3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Timp4Q9JHB3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Timp4Q9JHB3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.39■□□□□ 0.53
Timp4Q9JHB3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Timp4Q9JHB3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Timp4Q9JHB3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Timp4Q9JHB3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Timp4Q9JHB3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Timp4Q9JHB3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Timp4Q9JHB3 Gm24841-201ENSMUST00000158676 357 ntBASIC18.38■□□□□ 0.53
Timp4Q9JHB3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Timp4Q9JHB3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Timp4Q9JHB3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Timp4Q9JHB3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Timp4Q9JHB3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Timp4Q9JHB3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Timp4Q9JHB3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Timp4Q9JHB3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Timp4Q9JHB3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Timp4Q9JHB3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Timp4Q9JHB3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Timp4Q9JHB3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Timp4Q9JHB3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Timp4Q9JHB3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Timp4Q9JHB3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Timp4Q9JHB3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Timp4Q9JHB3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Timp4Q9JHB3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Timp4Q9JHB3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Timp4Q9JHB3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Timp4Q9JHB3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Timp4Q9JHB3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Timp4Q9JHB3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Timp4Q9JHB3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Timp4Q9JHB3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Timp4Q9JHB3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Timp4Q9JHB3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Timp4Q9JHB3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Timp4Q9JHB3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.36■□□□□ 0.53
Timp4Q9JHB3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.36■□□□□ 0.53
Timp4Q9JHB3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.36■□□□□ 0.53
Timp4Q9JHB3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Timp4Q9JHB3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Timp4Q9JHB3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Timp4Q9JHB3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Timp4Q9JHB3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Timp4Q9JHB3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms