Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.96□□□□□ -0.18
Tnfrsf13bQ9ET35 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Tnfrsf13bQ9ET35 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Tnfrsf13bQ9ET35 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.96□□□□□ -0.18
Tnfrsf13bQ9ET35 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Gm13234-201ENSMUST00000120010 747 ntBASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Tnfrsf13bQ9ET35 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfrsf13bQ9ET35 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfrsf13bQ9ET35 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfrsf13bQ9ET35 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms