Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps35Q9EQH3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps35Q9EQH3 Gm18666-201ENSMUST00000190039 958 ntBASIC17.71■□□□□ 0.43
Vps35Q9EQH3 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.71■□□□□ 0.43
Vps35Q9EQH3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.71■□□□□ 0.43
Vps35Q9EQH3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Vps35Q9EQH3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps35Q9EQH3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps35Q9EQH3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.71■□□□□ 0.42
Vps35Q9EQH3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.71■□□□□ 0.42
Vps35Q9EQH3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vps35Q9EQH3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps35Q9EQH3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps35Q9EQH3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps35Q9EQH3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vps35Q9EQH3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps35Q9EQH3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vps35Q9EQH3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps35Q9EQH3 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.7■□□□□ 0.42
Vps35Q9EQH3 Gm8520-201ENSMUST00000186517 868 ntBASIC17.7■□□□□ 0.42
Vps35Q9EQH3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps35Q9EQH3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps35Q9EQH3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Vps35Q9EQH3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps35Q9EQH3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps35Q9EQH3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps35Q9EQH3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps35Q9EQH3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps35Q9EQH3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps35Q9EQH3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps35Q9EQH3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.69■□□□□ 0.42
Vps35Q9EQH3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Vps35Q9EQH3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Gm5643-201ENSMUST00000117081 966 ntBASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Gm13168-201ENSMUST00000121771 632 ntBASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Gm10138-203ENSMUST00000206952 366 ntBASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Mtag2-201ENSMUST00000058665 714 ntBASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Vps35Q9EQH3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps35Q9EQH3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps35Q9EQH3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps35Q9EQH3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps35Q9EQH3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Vps35Q9EQH3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps35Q9EQH3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Vps35Q9EQH3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps35Q9EQH3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vps35Q9EQH3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps35Q9EQH3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vps35Q9EQH3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vps35Q9EQH3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps35Q9EQH3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vps35Q9EQH3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps35Q9EQH3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps35Q9EQH3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps35Q9EQH3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps35Q9EQH3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps35Q9EQH3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps35Q9EQH3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Vps35Q9EQH3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps35Q9EQH3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps35Q9EQH3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps35Q9EQH3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps35Q9EQH3 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.65■□□□□ 0.42
Vps35Q9EQH3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps35Q9EQH3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps35Q9EQH3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps35Q9EQH3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.65■□□□□ 0.42
Vps35Q9EQH3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps35Q9EQH3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.65■□□□□ 0.42
Vps35Q9EQH3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps35Q9EQH3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps35Q9EQH3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps35Q9EQH3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps35Q9EQH3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps35Q9EQH3 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.64■□□□□ 0.42
Vps35Q9EQH3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps35Q9EQH3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.64■□□□□ 0.41
Vps35Q9EQH3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps35Q9EQH3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Vps35Q9EQH3 Mir6349-201ENSMUST00000184059 97 ntBASIC17.64■□□□□ 0.41
Vps35Q9EQH3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms