Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rrp8Q9DB85 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rrp8Q9DB85 Gm16061-201ENSMUST00000122167 857 ntBASIC17.34■□□□□ 0.37
Rrp8Q9DB85 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rrp8Q9DB85 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rrp8Q9DB85 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rrp8Q9DB85 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rrp8Q9DB85 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rrp8Q9DB85 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rrp8Q9DB85 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rrp8Q9DB85 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rrp8Q9DB85 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rrp8Q9DB85 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Rrp8Q9DB85 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rrp8Q9DB85 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rrp8Q9DB85 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.33■□□□□ 0.37
Rrp8Q9DB85 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rrp8Q9DB85 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rrp8Q9DB85 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Gm10418-201ENSMUST00000100943 576 ntBASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.33■□□□□ 0.36
Rrp8Q9DB85 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rrp8Q9DB85 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.32■□□□□ 0.36
Rrp8Q9DB85 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rrp8Q9DB85 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rrp8Q9DB85 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rrp8Q9DB85 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rrp8Q9DB85 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Rrp8Q9DB85 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rrp8Q9DB85 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rrp8Q9DB85 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.32■□□□□ 0.36
Rrp8Q9DB85 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rrp8Q9DB85 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rrp8Q9DB85 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rrp8Q9DB85 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Gm13474-201ENSMUST00000122466 815 ntBASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rrp8Q9DB85 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rrp8Q9DB85 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rrp8Q9DB85 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rrp8Q9DB85 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rrp8Q9DB85 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rrp8Q9DB85 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rrp8Q9DB85 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rrp8Q9DB85 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rrp8Q9DB85 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.3■□□□□ 0.36
Rrp8Q9DB85 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rrp8Q9DB85 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rrp8Q9DB85 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.3■□□□□ 0.36
Rrp8Q9DB85 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rrp8Q9DB85 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rrp8Q9DB85 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp8Q9DB85 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp8Q9DB85 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp8Q9DB85 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp8Q9DB85 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp8Q9DB85 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp8Q9DB85 Gm7638-201ENSMUST00000121348 967 ntBASIC17.29■□□□□ 0.36
Rrp8Q9DB85 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.29■□□□□ 0.36
Rrp8Q9DB85 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.29■□□□□ 0.36
Rrp8Q9DB85 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp8Q9DB85 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.29■□□□□ 0.36
Rrp8Q9DB85 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp8Q9DB85 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp8Q9DB85 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms