Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.34■□□□□ 0.05
Mbd3l1Q9D9H3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Mbd3l1Q9D9H3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Mbd3l1Q9D9H3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Mbd3l1Q9D9H3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Mbd3l1Q9D9H3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Mbd3l1Q9D9H3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.33■□□□□ 0.05
Mbd3l1Q9D9H3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.33■□□□□ 0.05
Mbd3l1Q9D9H3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.33■□□□□ 0.05
Mbd3l1Q9D9H3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 Etf1-202ENSMUST00000180351 108 ntBASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 Serp2-204ENSMUST00000228055 705 ntBASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mbd3l1Q9D9H3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Gm11687-201ENSMUST00000118911 886 ntBASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Mbd3l1Q9D9H3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mbd3l1Q9D9H3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms