Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ShpkQ9D5J6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShpkQ9D5J6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ShpkQ9D5J6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
ShpkQ9D5J6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ShpkQ9D5J6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ShpkQ9D5J6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
ShpkQ9D5J6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.83□□□□□ -0.04
ShpkQ9D5J6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShpkQ9D5J6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShpkQ9D5J6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ShpkQ9D5J6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShpkQ9D5J6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ShpkQ9D5J6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShpkQ9D5J6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShpkQ9D5J6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShpkQ9D5J6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ShpkQ9D5J6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ShpkQ9D5J6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ShpkQ9D5J6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.79□□□□□ -0.04
ShpkQ9D5J6 Gm13216-201ENSMUST00000117145 591 ntBASIC14.79□□□□□ -0.04
ShpkQ9D5J6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShpkQ9D5J6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShpkQ9D5J6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.79□□□□□ -0.04
ShpkQ9D5J6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.79□□□□□ -0.04
ShpkQ9D5J6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
ShpkQ9D5J6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShpkQ9D5J6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ShpkQ9D5J6 Gm5921-201ENSMUST00000075898 882 ntBASIC14.79□□□□□ -0.04
ShpkQ9D5J6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShpkQ9D5J6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShpkQ9D5J6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShpkQ9D5J6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShpkQ9D5J6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShpkQ9D5J6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ShpkQ9D5J6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShpkQ9D5J6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms