Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk1aQ9D132 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Upk1aQ9D132 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk1aQ9D132 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk1aQ9D132 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk1aQ9D132 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.8■□□□□ 0.28
Upk1aQ9D132 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk1aQ9D132 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk1aQ9D132 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk1aQ9D132 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.8■□□□□ 0.28
Upk1aQ9D132 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk1aQ9D132 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Upk1aQ9D132 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Upk1aQ9D132 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk1aQ9D132 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Upk1aQ9D132 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk1aQ9D132 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk1aQ9D132 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk1aQ9D132 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.8■□□□□ 0.28
Upk1aQ9D132 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk1aQ9D132 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk1aQ9D132 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk1aQ9D132 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.79■□□□□ 0.28
Upk1aQ9D132 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Upk1aQ9D132 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk1aQ9D132 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Upk1aQ9D132 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk1aQ9D132 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Upk1aQ9D132 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk1aQ9D132 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.79■□□□□ 0.28
Upk1aQ9D132 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk1aQ9D132 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.79■□□□□ 0.28
Upk1aQ9D132 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.79■□□□□ 0.28
Upk1aQ9D132 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.79■□□□□ 0.28
Upk1aQ9D132 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk1aQ9D132 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk1aQ9D132 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk1aQ9D132 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.78■□□□□ 0.28
Upk1aQ9D132 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.78■□□□□ 0.28
Upk1aQ9D132 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.78■□□□□ 0.28
Upk1aQ9D132 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1aQ9D132 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.77■□□□□ 0.28
Upk1aQ9D132 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1aQ9D132 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1aQ9D132 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1aQ9D132 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1aQ9D132 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1aQ9D132 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1aQ9D132 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1aQ9D132 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.77■□□□□ 0.28
Upk1aQ9D132 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1aQ9D132 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.77■□□□□ 0.28
Upk1aQ9D132 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Upk1aQ9D132 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1aQ9D132 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Upk1aQ9D132 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Upk1aQ9D132 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Upk1aQ9D132 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1aQ9D132 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.76■□□□□ 0.27
Upk1aQ9D132 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1aQ9D132 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Upk1aQ9D132 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1aQ9D132 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1aQ9D132 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.76■□□□□ 0.27
Upk1aQ9D132 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1aQ9D132 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1aQ9D132 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1aQ9D132 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1aQ9D132 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.76■□□□□ 0.27
Upk1aQ9D132 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1aQ9D132 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1aQ9D132 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1aQ9D132 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.75■□□□□ 0.27
Upk1aQ9D132 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Upk1aQ9D132 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Upk1aQ9D132 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms