Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr1Q9CY50 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr1Q9CY50 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr1Q9CY50 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr1Q9CY50 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr1Q9CY50 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ssr1Q9CY50 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssr1Q9CY50 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.16■□□□□ 0.66
Ssr1Q9CY50 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssr1Q9CY50 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssr1Q9CY50 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssr1Q9CY50 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.16■□□□□ 0.66
Ssr1Q9CY50 AV356131-201ENSMUST00000206201 750 ntBASIC19.16■□□□□ 0.66
Ssr1Q9CY50 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssr1Q9CY50 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssr1Q9CY50 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssr1Q9CY50 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ssr1Q9CY50 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ssr1Q9CY50 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssr1Q9CY50 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssr1Q9CY50 Tgds-204ENSMUST00000228543 1594 ntBASIC19.15■□□□□ 0.66
Ssr1Q9CY50 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ssr1Q9CY50 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.15■□□□□ 0.66
Ssr1Q9CY50 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssr1Q9CY50 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssr1Q9CY50 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssr1Q9CY50 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ssr1Q9CY50 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.15■□□□□ 0.66
Ssr1Q9CY50 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.15■□□□□ 0.66
Ssr1Q9CY50 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssr1Q9CY50 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssr1Q9CY50 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssr1Q9CY50 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC19.15■□□□□ 0.66
Ssr1Q9CY50 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.15■□□□□ 0.66
Ssr1Q9CY50 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ssr1Q9CY50 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssr1Q9CY50 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.14■□□□□ 0.65
Ssr1Q9CY50 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ssr1Q9CY50 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ssr1Q9CY50 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.14■□□□□ 0.65
Ssr1Q9CY50 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Ssr1Q9CY50 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.14■□□□□ 0.65
Ssr1Q9CY50 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssr1Q9CY50 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ssr1Q9CY50 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssr1Q9CY50 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ssr1Q9CY50 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.14■□□□□ 0.65
Ssr1Q9CY50 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.14■□□□□ 0.65
Ssr1Q9CY50 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssr1Q9CY50 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssr1Q9CY50 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssr1Q9CY50 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssr1Q9CY50 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Ssr1Q9CY50 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Ssr1Q9CY50 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssr1Q9CY50 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssr1Q9CY50 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssr1Q9CY50 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssr1Q9CY50 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssr1Q9CY50 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssr1Q9CY50 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssr1Q9CY50 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms