Protein–RNA interactions for Protein: Q9CY21

Bud23, Probable 18S rRNA (guanine-N(7))-methyltransferase, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bud23Q9CY21 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Bud23Q9CY21 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Gm15565-201ENSMUST00000118890 427 ntBASIC17.11■□□□□ 0.33
Bud23Q9CY21 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Bud23Q9CY21 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Bud23Q9CY21 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.09■□□□□ 0.33
Bud23Q9CY21 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.09■□□□□ 0.33
Bud23Q9CY21 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Tgds-204ENSMUST00000228543 1594 ntBASIC17.09■□□□□ 0.33
Bud23Q9CY21 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Bud23Q9CY21 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Bud23Q9CY21 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Bud23Q9CY21 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Bud23Q9CY21 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Bud23Q9CY21 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.08■□□□□ 0.33
Bud23Q9CY21 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Bud23Q9CY21 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Bud23Q9CY21 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Bud23Q9CY21 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Bud23Q9CY21 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Bud23Q9CY21 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.08■□□□□ 0.32
Bud23Q9CY21 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Bud23Q9CY21 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Bud23Q9CY21 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Bud23Q9CY21 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.08■□□□□ 0.32
Bud23Q9CY21 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.08■□□□□ 0.32
Bud23Q9CY21 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Bud23Q9CY21 Gm5417-201ENSMUST00000079706 384 ntBASIC17.08■□□□□ 0.32
Bud23Q9CY21 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Bud23Q9CY21 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Bud23Q9CY21 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Bud23Q9CY21 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Bud23Q9CY21 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Bud23Q9CY21 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Bud23Q9CY21 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Bud23Q9CY21 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Bud23Q9CY21 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.07■□□□□ 0.32
Bud23Q9CY21 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.07■□□□□ 0.32
Bud23Q9CY21 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Bud23Q9CY21 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Bud23Q9CY21 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Bud23Q9CY21 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Bud23Q9CY21 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Bud23Q9CY21 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Bud23Q9CY21 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.07■□□□□ 0.32
Bud23Q9CY21 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Bud23Q9CY21 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.07■□□□□ 0.32
Bud23Q9CY21 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms