Protein–RNA interactions for Protein: Q9CR92

Ccdc96, Coiled-coil domain-containing protein 96, mousemouse

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc96Q9CR92 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Mir7071-201ENSMUST00000184847 69 ntBASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc96Q9CR92 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc96Q9CR92 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Ccdc96Q9CR92 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc96Q9CR92 Mir6982-201ENSMUST00000184354 68 ntBASIC20.17■□□□□ 0.82
Ccdc96Q9CR92 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc96Q9CR92 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc96Q9CR92 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc96Q9CR92 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc96Q9CR92 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc96Q9CR92 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc96Q9CR92 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc96Q9CR92 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc96Q9CR92 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc96Q9CR92 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc96Q9CR92 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc96Q9CR92 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc96Q9CR92 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc96Q9CR92 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.16■□□□□ 0.82
Ccdc96Q9CR92 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ccdc96Q9CR92 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc96Q9CR92 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc96Q9CR92 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc96Q9CR92 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.16■□□□□ 0.82
Ccdc96Q9CR92 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc96Q9CR92 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc96Q9CR92 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.16■□□□□ 0.82
Ccdc96Q9CR92 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc96Q9CR92 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc96Q9CR92 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc96Q9CR92 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc96Q9CR92 Gm15378-201ENSMUST00000121894 207 ntBASIC20.15■□□□□ 0.82
Ccdc96Q9CR92 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc96Q9CR92 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.15■□□□□ 0.82
Ccdc96Q9CR92 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc96Q9CR92 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.15■□□□□ 0.82
Ccdc96Q9CR92 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.15■□□□□ 0.82
Ccdc96Q9CR92 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc96Q9CR92 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc96Q9CR92 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc96Q9CR92 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.15■□□□□ 0.82
Ccdc96Q9CR92 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc96Q9CR92 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc96Q9CR92 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc96Q9CR92 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.14■□□□□ 0.82
Ccdc96Q9CR92 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc96Q9CR92 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ccdc96Q9CR92 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc96Q9CR92 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc96Q9CR92 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc96Q9CR92 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc96Q9CR92 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc96Q9CR92 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.14■□□□□ 0.81
Ccdc96Q9CR92 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.14■□□□□ 0.81
Ccdc96Q9CR92 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc96Q9CR92 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc96Q9CR92 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc96Q9CR92 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Ccdc96Q9CR92 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc96Q9CR92 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ccdc96Q9CR92 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms