Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17■□□□□ 0.31
Msantd3Q9CR78 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msantd3Q9CR78 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msantd3Q9CR78 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Gm45058-201ENSMUST00000205810 766 ntBASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msantd3Q9CR78 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.98■□□□□ 0.31
Msantd3Q9CR78 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Gm21362-201ENSMUST00000194272 928 ntBASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msantd3Q9CR78 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msantd3Q9CR78 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msantd3Q9CR78 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msantd3Q9CR78 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msantd3Q9CR78 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msantd3Q9CR78 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Msantd3Q9CR78 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.97■□□□□ 0.31
Msantd3Q9CR78 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msantd3Q9CR78 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msantd3Q9CR78 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Msantd3Q9CR78 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msantd3Q9CR78 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.97■□□□□ 0.31
Msantd3Q9CR78 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msantd3Q9CR78 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.97■□□□□ 0.31
Msantd3Q9CR78 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msantd3Q9CR78 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msantd3Q9CR78 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.96■□□□□ 0.31
Msantd3Q9CR78 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msantd3Q9CR78 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msantd3Q9CR78 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.96■□□□□ 0.31
Msantd3Q9CR78 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Msantd3Q9CR78 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msantd3Q9CR78 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msantd3Q9CR78 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Msantd3Q9CR78 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Msantd3Q9CR78 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Msantd3Q9CR78 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Msantd3Q9CR78 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Msantd3Q9CR78 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.96■□□□□ 0.3
Msantd3Q9CR78 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msantd3Q9CR78 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msantd3Q9CR78 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msantd3Q9CR78 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Msantd3Q9CR78 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Msantd3Q9CR78 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msantd3Q9CR78 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Msantd3Q9CR78 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.95■□□□□ 0.3
Msantd3Q9CR78 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.95■□□□□ 0.3
Msantd3Q9CR78 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.95■□□□□ 0.3
Msantd3Q9CR78 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.95■□□□□ 0.3
Msantd3Q9CR78 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Msantd3Q9CR78 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Msantd3Q9CR78 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.95■□□□□ 0.3
Msantd3Q9CR78 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms