Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Mir6349-201ENSMUST00000184059 97 ntBASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 Gm42545-201ENSMUST00000202755 922 ntBASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retreg3Q9CQV4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.43
Retreg3Q9CQV4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.77■□□□□ 0.43
Retreg3Q9CQV4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 Gm13401-201ENSMUST00000117074 291 ntBASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 Gm18666-201ENSMUST00000190039 958 ntBASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 Gm18025-201ENSMUST00000221733 862 ntBASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg3Q9CQV4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg3Q9CQV4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg3Q9CQV4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg3Q9CQV4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg3Q9CQV4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg3Q9CQV4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Retreg3Q9CQV4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg3Q9CQV4 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg3Q9CQV4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg3Q9CQV4 Gm29791-202ENSMUST00000207888 369 ntBASIC17.75■□□□□ 0.43
Retreg3Q9CQV4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg3Q9CQV4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg3Q9CQV4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg3Q9CQV4 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.75■□□□□ 0.43
Retreg3Q9CQV4 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.75■□□□□ 0.43
Retreg3Q9CQV4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg3Q9CQV4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.74■□□□□ 0.43
Retreg3Q9CQV4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg3Q9CQV4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg3Q9CQV4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg3Q9CQV4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.74■□□□□ 0.43
Retreg3Q9CQV4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg3Q9CQV4 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.74■□□□□ 0.43
Retreg3Q9CQV4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg3Q9CQV4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg3Q9CQV4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg3Q9CQV4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 Gm37292-201ENSMUST00000192062 758 ntBASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms