Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.46□□□□□ -0.09
RTRAFQ9CQE8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RTRAFQ9CQE8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RTRAFQ9CQE8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RTRAFQ9CQE8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RTRAFQ9CQE8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RTRAFQ9CQE8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RTRAFQ9CQE8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTRAFQ9CQE8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTRAFQ9CQE8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTRAFQ9CQE8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTRAFQ9CQE8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTRAFQ9CQE8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RTRAFQ9CQE8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RTRAFQ9CQE8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTRAFQ9CQE8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTRAFQ9CQE8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTRAFQ9CQE8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTRAFQ9CQE8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTRAFQ9CQE8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.44□□□□□ -0.1
RTRAFQ9CQE8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTRAFQ9CQE8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTRAFQ9CQE8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTRAFQ9CQE8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTRAFQ9CQE8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Gm22238-201ENSMUST00000175222 88 ntBASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTRAFQ9CQE8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.42□□□□□ -0.1
RTRAFQ9CQE8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms