Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa3Q9CQ71 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.71■□□□□ 0.59
Rpa3Q9CQ71 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.71■□□□□ 0.59
Rpa3Q9CQ71 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.71■□□□□ 0.59
Rpa3Q9CQ71 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa3Q9CQ71 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa3Q9CQ71 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rpa3Q9CQ71 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.71■□□□□ 0.59
Rpa3Q9CQ71 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa3Q9CQ71 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Rpa3Q9CQ71 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Mir6349-201ENSMUST00000184059 97 ntBASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Gm18666-201ENSMUST00000190039 958 ntBASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa3Q9CQ71 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa3Q9CQ71 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rpa3Q9CQ71 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa3Q9CQ71 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa3Q9CQ71 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa3Q9CQ71 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa3Q9CQ71 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa3Q9CQ71 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa3Q9CQ71 Gm15375-201ENSMUST00000119510 849 ntBASIC18.69■□□□□ 0.58
Rpa3Q9CQ71 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa3Q9CQ71 Gm10653-202ENSMUST00000139570 835 ntBASIC18.69■□□□□ 0.58
Rpa3Q9CQ71 Gm20760-201ENSMUST00000179197 648 ntBASIC18.69■□□□□ 0.58
Rpa3Q9CQ71 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa3Q9CQ71 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Rpa3Q9CQ71 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa3Q9CQ71 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.68■□□□□ 0.58
Rpa3Q9CQ71 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa3Q9CQ71 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa3Q9CQ71 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.68■□□□□ 0.58
Rpa3Q9CQ71 Mir2861-201ENSMUST00000175539 82 ntBASIC18.68■□□□□ 0.58
Rpa3Q9CQ71 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.68■□□□□ 0.58
Rpa3Q9CQ71 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.68■□□□□ 0.58
Rpa3Q9CQ71 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa3Q9CQ71 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.68■□□□□ 0.58
Rpa3Q9CQ71 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa3Q9CQ71 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa3Q9CQ71 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa3Q9CQ71 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa3Q9CQ71 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa3Q9CQ71 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rpa3Q9CQ71 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.68■□□□□ 0.58
Rpa3Q9CQ71 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Gm10418-201ENSMUST00000100943 576 ntBASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa3Q9CQ71 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms