Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Olfr129-201ENSMUST00000122318 993 ntBASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Gm11594-201ENSMUST00000122313 162 ntBASIC18.11■□□□□ 0.49
Cdh23Q99PF4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.1■□□□□ 0.49
Cdh23Q99PF4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.1■□□□□ 0.49
Cdh23Q99PF4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh23Q99PF4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh23Q99PF4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh23Q99PF4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Cdh23Q99PF4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cdh23Q99PF4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh23Q99PF4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh23Q99PF4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh23Q99PF4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh23Q99PF4 Mir770-201ENSMUST00000103252 94 ntBASIC18.09■□□□□ 0.49
Cdh23Q99PF4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Cdh23Q99PF4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.09■□□□□ 0.49
Cdh23Q99PF4 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.09■□□□□ 0.49
Cdh23Q99PF4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.09■□□□□ 0.49
Cdh23Q99PF4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdh23Q99PF4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdh23Q99PF4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdh23Q99PF4 Fst-202ENSMUST00000223640 2612 ntBASIC18.08■□□□□ 0.49
Cdh23Q99PF4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdh23Q99PF4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.08■□□□□ 0.48
Cdh23Q99PF4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cdh23Q99PF4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.08■□□□□ 0.48
Cdh23Q99PF4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Cdh23Q99PF4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdh23Q99PF4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdh23Q99PF4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.08■□□□□ 0.48
Cdh23Q99PF4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.08■□□□□ 0.48
Cdh23Q99PF4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdh23Q99PF4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdh23Q99PF4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cdh23Q99PF4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cdh23Q99PF4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.07■□□□□ 0.48
Cdh23Q99PF4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh23Q99PF4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh23Q99PF4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cdh23Q99PF4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh23Q99PF4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cdh23Q99PF4 Actl10-202ENSMUST00000226583 1501 ntBASIC18.07■□□□□ 0.48
Cdh23Q99PF4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh23Q99PF4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cdh23Q99PF4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.07■□□□□ 0.48
Cdh23Q99PF4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh23Q99PF4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.07■□□□□ 0.48
Cdh23Q99PF4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh23Q99PF4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh23Q99PF4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh23Q99PF4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh23Q99PF4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh23Q99PF4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh23Q99PF4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.06■□□□□ 0.48
Cdh23Q99PF4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Cdh23Q99PF4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh23Q99PF4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh23Q99PF4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh23Q99PF4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.06■□□□□ 0.48
Cdh23Q99PF4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh23Q99PF4 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.06■□□□□ 0.48
Cdh23Q99PF4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh23Q99PF4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cdh23Q99PF4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.06■□□□□ 0.48
Cdh23Q99PF4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh23Q99PF4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.06■□□□□ 0.48
Cdh23Q99PF4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh23Q99PF4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.05■□□□□ 0.48
Cdh23Q99PF4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cdh23Q99PF4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms