Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 Mir7071-201ENSMUST00000184847 69 ntBASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd3Q99LE3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lysmd3Q99LE3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lysmd3Q99LE3 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.33■□□□□ 0.53
Lysmd3Q99LE3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lysmd3Q99LE3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Lysmd3Q99LE3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lysmd3Q99LE3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Lysmd3Q99LE3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lysmd3Q99LE3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.33■□□□□ 0.52
Lysmd3Q99LE3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.33■□□□□ 0.52
Lysmd3Q99LE3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lysmd3Q99LE3 Gm5417-201ENSMUST00000079706 384 ntBASIC18.33■□□□□ 0.52
Lysmd3Q99LE3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Lysmd3Q99LE3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lysmd3Q99LE3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lysmd3Q99LE3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lysmd3Q99LE3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lysmd3Q99LE3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lysmd3Q99LE3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lysmd3Q99LE3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd3Q99LE3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 Gm10418-201ENSMUST00000100943 576 ntBASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 Gm15565-201ENSMUST00000118890 427 ntBASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 Gm10517-202ENSMUST00000192970 758 ntBASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.31■□□□□ 0.52
Lysmd3Q99LE3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd3Q99LE3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd3Q99LE3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms