Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Usp11Q99K46 Rab3c-203ENSMUST00000224180 967 ntBASIC18.64■□□□□ 0.57
Usp11Q99K46 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp11Q99K46 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Usp11Q99K46 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp11Q99K46 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp11Q99K46 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp11Q99K46 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp11Q99K46 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp11Q99K46 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp11Q99K46 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp11Q99K46 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp11Q99K46 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp11Q99K46 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp11Q99K46 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Usp11Q99K46 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Usp11Q99K46 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp11Q99K46 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp11Q99K46 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Usp11Q99K46 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
Usp11Q99K46 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp11Q99K46 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp11Q99K46 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp11Q99K46 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.63■□□□□ 0.57
Usp11Q99K46 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.63■□□□□ 0.57
Usp11Q99K46 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.63■□□□□ 0.57
Usp11Q99K46 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp11Q99K46 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Usp11Q99K46 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp11Q99K46 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp11Q99K46 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp11Q99K46 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp11Q99K46 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp11Q99K46 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp11Q99K46 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp11Q99K46 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp11Q99K46 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Usp11Q99K46 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp11Q99K46 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.62■□□□□ 0.57
Usp11Q99K46 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.62■□□□□ 0.57
Usp11Q99K46 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp11Q99K46 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Usp11Q99K46 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp11Q99K46 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.62■□□□□ 0.57
Usp11Q99K46 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp11Q99K46 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp11Q99K46 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp11Q99K46 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp11Q99K46 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp11Q99K46 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Usp11Q99K46 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp11Q99K46 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp11Q99K46 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp11Q99K46 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp11Q99K46 Gm12441-201ENSMUST00000121806 588 ntBASIC18.61■□□□□ 0.57
Usp11Q99K46 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp11Q99K46 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Usp11Q99K46 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp11Q99K46 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp11Q99K46 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp11Q99K46 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.61■□□□□ 0.57
Usp11Q99K46 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.61■□□□□ 0.57
Usp11Q99K46 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp11Q99K46 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp11Q99K46 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp11Q99K46 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Usp11Q99K46 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp11Q99K46 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp11Q99K46 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp11Q99K46 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp11Q99K46 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp11Q99K46 Fst-202ENSMUST00000223640 2612 ntBASIC18.6■□□□□ 0.57
Usp11Q99K46 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp11Q99K46 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp11Q99K46 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Usp11Q99K46 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp11Q99K46 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Usp11Q99K46 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp11Q99K46 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp11Q99K46 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Usp11Q99K46 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp11Q99K46 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp11Q99K46 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.59■□□□□ 0.57
Usp11Q99K46 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.59■□□□□ 0.57
Usp11Q99K46 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp11Q99K46 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp11Q99K46 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp11Q99K46 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.59■□□□□ 0.57
Usp11Q99K46 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Usp11Q99K46 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp11Q99K46 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp11Q99K46 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp11Q99K46 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp11Q99K46 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp11Q99K46 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp11Q99K46 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp11Q99K46 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp11Q99K46 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Usp11Q99K46 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp11Q99K46 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms